RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SLC2A14Q8TDB8 520 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 STARD8Q92502 1023 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ISG20Q96AZ6 181 aaKnown RBP3.49□□□□□ -1.85
CCDC54-201ENST00000261058 TMEM45BQ96B21 275 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 TTYH2Q9BSA4 534 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 RAB11FIP5Q9BXF6 653 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 FAM192AQ9GZU8 254 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 AZI2Q9H6S1 392 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 LRRC19Q9H756 370 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 METTL7AQ9H8H3 244 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 SP140LQ9H930 580 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 LHX3Q9UBR4 397 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 MIOXQ9UGB7 285 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 MLXQ9UH92 298 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 CIDEBQ9UHD4 219 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 ANGPTL2Q9UKU9 493 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 MGAT4AQ9UM21 535 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 DDX19BQ9UMR2 479 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 STYXL1Q9Y6J8 313 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 RALGAPA1Q6GYQ0 2036 aa3.49□□□□□ -1.85
CCDC54-201ENST00000261058 PARD3Q8TEW0 1356 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 TEX48A0A1B0GUV7 120 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 MBLAC1A4D2B0 266 aaPredicted RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 HELTA6NFD8 242 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 OR5K4A6NMS3 321 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 OR52A4PA6NMU1 304 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ALOX15BO15296 676 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ATP8B1O43520 1251 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 LANCL1O43813 399 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 GALR3O60755 368 aaPredicted RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 SNNO75324 88 aaPredicted RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 VPS26AO75436 327 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 OAS1P00973 400 aaKnown RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 CRYGCP07315 174 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ALOX5P09917 674 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 S100A1P23297 94 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 IL32P24001 234 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 HOXA6P31267 233 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 AKT2P31751 481 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 NPY2RP49146 381 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 NUMBP49757 651 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 MYL6P60660 151 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 OTUD4Q01804 1114 aaKnown RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ASPHQ12797 758 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 DNAJC3Q13217 504 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 SPCS2Q15005 226 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 NCR3LG1Q68D85 454 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 FBXL22Q6P050 247 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ARMCX5Q6P1M9 558 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 LRRC8BQ6P9F7 803 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 MOB2Q70IA6 237 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 FAM228AQ86W67 206 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 CDR2LQ86X02 465 aaPredicted RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 STX12Q86Y82 276 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 MISPQ8IVT2 679 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 COMMD1Q8N668 190 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 BEST4Q8NFU0 473 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 OR4Q3Q8NH05 313 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 TMIGD2Q96BF3 282 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 SENP8Q96LD8 212 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 CPXM1Q96SM3 734 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 RBM24Q9BX46 236 aaKnown RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 MRPL13Q9BYD1 178 aaKnown RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 FAM124BQ9H5Z6 455 aaPredicted RBP3.48□□□□□ -1.85
CCDC54-201ENST00000261058 LZTFL1Q9NQ48 299 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 NDUFA13Q9P0J0 144 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF581Q9P0T4 197 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 COPS7AQ9UBW8 275 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 EMCNQ9ULC0 261 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF175Q9Y473 711 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 CPQQ9Y646 472 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 SYNJ2O15056 1496 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 SBNO1A3KN83 1393 aa3.48□□□□□ -1.85
CCDC54-201ENST00000261058 LOC100506127A0A0U1RQW1 187 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 H3BQV1 296 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF264O43296 627 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 LGI1O95970 557 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 SERPINA3P01011 423 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 HLA-DRAP01903 254 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 MT-ND1P03886 318 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 OPN1LWP04000 364 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 FCGR3AP08637 254 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 SLC2A3P11169 496 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 CD1BP29016 333 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 GCKP35557 465 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 SLC11A1P49279 550 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 POLR2GP62487 172 aaKnown RBP eCLIP3.47□□□□□ -1.85
CCDC54-201ENST00000261058 KDSRQ06136 332 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 CASP8Q14790 479 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 MOGQ16653 247 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 BEND6Q5SZJ8 279 aaPredicted RBP3.47□□□□□ -1.85
CCDC54-201ENST00000261058 CARD17Q5XLA6 110 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 SEL1L3Q68CR1 1132 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 REP15Q6BDI9 236 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 ATRAIDQ6UW56 229 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 BZW1Q7L1Q6 419 aaKnown RBP3.47□□□□□ -1.85
CCDC54-201ENST00000261058 SLC25A42Q86VD7 318 aa3.47□□□□□ -1.85
CCDC54-201ENST00000261058 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms