RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SLC5A8Q8N695 610 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 LIPHQ8WWY8 451 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 TMBIM1Q969X1 311 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 SLC46A1Q96NT5 459 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 CHID1Q9BWS9 393 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 DIABLOQ9NR28 239 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 OPTCQ9UBM4 332 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 FBXO4Q9UKT5 387 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 DOPEY2Q9Y3R5 2298 aa5.09□□□□□ -1.59
TOPBP1-201ENST00000260810 A0A0B4J2E0 115 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 SPAARA0A1B0GVQ0 90 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 A0A1B0GX12 115 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 PEX1O43933 1283 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 FTH1P02794 183 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 IL7RP16871 459 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 LBPP18428 481 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 GTF2E2P29084 291 aaKnown RBP5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 PCGF2P35227 344 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 NUP62P37198 522 aaPredicted RBP5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 RABIFP47224 123 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF141Q15928 474 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 GSTA3Q16772 222 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 MLIPQ5VWP3 458 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 HLA-DQA1Q5Y7H0 255 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 C1orf94Q6P1W5 598 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 PAGE2Q7Z2X7 111 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 TGIF2LYQ8IUE0 185 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 PQLC1Q8N2U9 271 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 OR11G2Q8NGC1 345 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 MOSPD2Q8NHP6 518 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 CNIH3Q8TBE1 160 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 MS4A3Q96HJ5 214 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 OR5M11Q96RB7 305 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 BDH2Q9BUT1 245 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 ING2Q9H160 280 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 IRF2BPLQ9H1B7 796 aa5.09□□□□□ -1.6
TOPBP1-201ENST00000260810 RYR2Q92736 4967 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PIGBOS1A0A0B4J2F0 54 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 LILRA1O75019 489 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 RASAL1O95294 804 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NR2C1P13056 603 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ABCD3P28288 659 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TFF3Q07654 80 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PCK2Q16822 640 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 GRAMD2AQ8IUY3 354 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 MCATQ8IVS2 390 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM132CQ8N3T6 1108 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 C17orf47Q8NEP4 570 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 OR4D9Q8NGE8 314 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 C3orf49Q96BT1 292 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF300Q96RE9 604 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 FBRSQ9HAH7 460 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF304Q9HCX3 659 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 HRASLS2Q9NWW9 162 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PSME2Q9UL46 239 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 MKLN1Q9UL63 735 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PRR33A8MZF0 331 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 SOX30O94993 753 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ADRA2CP18825 462 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 SERPINB1P30740 379 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CLN3Q13286 438 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NNATQ16517 81 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ZC3H12BQ5HYM0 836 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF691Q5VV52 312 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 DNM1P46Q6ZS02 220 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 GPR119Q8TDV5 335 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CYGBQ8WWM9 190 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 KLHL29Q96CT2 875 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PCBD2Q9H0N5 130 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 SIGLEC7Q9Y286 467 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 SH3PXD2BA1X283 911 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 XPNPEP2O43895 674 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 RASGRP1O95267 797 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ECDO95905 644 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 VIPP01282 170 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PEPDP12955 493 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 S100GP29377 79 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 RPS27P42677 84 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 BNIP2Q12982 314 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNHIT3Q15649 155 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NDUFA9Q16795 377 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 LRRC36Q1X8D7 754 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ANKRD37Q7Z713 158 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 OR52N2Q8NGI0 321 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 YIPF6Q96EC8 236 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 KTI12Q96EK9 354 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 ISG20L2Q9H9L3 353 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PALMDQ9NP74 551 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 PAPOLBQ9NRJ5 636 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 CD274Q9NZQ7 290 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 FN1P02751 2386 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM220BPB1ANY3 271 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 H3BUI4 141 aa5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 NSA2O95478 260 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-201ENST00000260810 IFI6P09912 130 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms