RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 RMND5AQ9H871 391 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 GALNT9Q9HCQ5 603 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SERHLQ9NQF3 203 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 PCDHGB3Q9Y5G1 929 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 C2orf72A6NCS6 295 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 RFXANKO14593 260 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 POU6F2P78424 691 aaPredicted RBP15.31■□□□□ 0.04
SDCBP-201ENST00000260130 RBPJQ06330 500 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SLC10A1Q14973 349 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 TIGD2Q4W5G0 525 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 TIGD3Q6B0B8 471 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 FIGNL1Q6PIW4 674 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF621Q6ZSS3 439 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 CBR4Q8N4T8 237 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 VPS33AQ96AX1 596 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SLC35G5Q96KT7 338 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 SLC35A5Q9BS91 424 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 TMEM45AQ9NWC5 275 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 B4GALT7Q9UBV7 327 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 OSGIN2Q9Y236 505 aa15.31■□□□□ 0.04
SDCBP-201ENST00000260130 DUXAA6NLW8 204 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 FADS1O60427 444 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 CDC40O60508 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 PDE9AO76083 593 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 SLC6A2P23975 617 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 ELAVL4P26378 380 aaKnown RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 EVI2BP34910 448 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 CHI3L1P36222 383 aaPredicted RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 CDKN2CP42773 168 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 RPS26P62854 115 aaKnown RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 HSF1Q00613 529 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 SAXO2Q658L1 398 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 TTC33Q6PID6 262 aaPredicted RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 BLOC1S3Q6QNY0 202 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 ANGPTL8Q6UXH0 198 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 GPR141Q7Z602 305 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 GALNT10Q86SR1 603 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 OR5D16Q8NGK9 328 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 OR1J4Q8NGS1 313 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 TMIGD2Q96BF3 282 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 NEURL3Q96EH8 262 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 ITCHQ96J02 903 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 OR7D2Q96RA2 312 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 G6PC3Q9BUM1 346 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 ADI1Q9BV57 179 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF703Q9H7S9 590 aaPredicted RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 CMTM6Q9NX76 183 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 QPCTLQ9NXS2 382 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 FLRT3Q9NZU0 649 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 GMPR2Q9P2T1 348 aaKnown RBP15.3■□□□□ 0.04
SDCBP-201ENST00000260130 EGFL7Q9UHF1 273 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 KCNE3Q9Y6H6 103 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 EML6Q6ZMW3 1958 aa15.3■□□□□ 0.04
SDCBP-201ENST00000260130 TRIM64CA6NLI5 447 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 FXYD1O00168 92 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 GNB5O14775 395 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 UTS2O95399 124 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 GSNP06396 782 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 MERTKQ12866 999 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 RCAN2Q14206 197 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 MIPOL1Q8TD10 442 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 SERHL2Q9H4I8 314 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 FBXO34Q9NWN3 711 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 ABCG2Q9UNQ0 655 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 WIF1Q9Y5W5 379 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 FLNCQ14315 2725 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 A0A1W2PP18 115 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF701M0R085 212 aaPredicted RBP15.29■□□□□ 0.04
SDCBP-201ENST00000260130 SNPHO15079 494 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 ARPC2O15144 300 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 CELA3AP09093 270 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 GDF1P27539 372 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 LCN1P31025 176 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 CLK3P49761 638 aaKnown RBP15.29■□□□□ 0.04
SDCBP-201ENST00000260130 CAPRIN1Q14444 709 aaKnown RBP15.29■□□□□ 0.04
SDCBP-201ENST00000260130 ATP6AP1Q15904 470 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 CCNJQ5T5M9 372 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 ADAMTS16Q8TE57 1224 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 GMEB1Q9Y692 573 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 NUP214P35658 2090 aaPredicted RBP15.29■□□□□ 0.04
SDCBP-201ENST00000260130 EXPH5Q8NEV8 1989 aa15.29■□□□□ 0.04
SDCBP-201ENST00000260130 SVILO95425 2214 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 A0A1B0GTH9 108 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 IGHG3P01860 377 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 UMPSP11172 480 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 RANBP1P43487 201 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 GAS1P54826 345 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 CASP9P55211 416 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 NUP107P57740 925 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 NFYCQ13952 458 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ZBED5Q49AG3 693 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 DCST2Q5T1A1 773 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ARHGAP11AQ6P4F7 1023 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 EPHX4Q8IUS5 362 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ADGRG5Q8IZF4 528 aa15.28■□□□□ 0.04
SDCBP-201ENST00000260130 ZNF786Q8N393 782 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms