RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SFTPDP35247 375 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 PCYT1AP49585 367 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 CTBP2P56545 445 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 FOXF1Q12946 379 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 NDUFAF6Q330K2 333 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 HBMQ6B0K9 141 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 CBLN3Q6UW01 205 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 CXorf67Q86X51 503 aaPredicted RBP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 KRTAP1-3Q8IUG1 177 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 MISPQ8IVT2 679 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 LILRA2Q8N149 483 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 ADAMTS15Q8TE58 950 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 COQ8BQ96D53 544 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 POM121Q96HA1 1249 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 PKNOX2Q96KN3 472 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 PPP1R36Q96LQ0 422 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 SMR3AQ99954 134 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 UBTD1Q9HAC8 227 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 PLSCR4Q9NRQ2 329 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 GPATCH2Q9NW75 528 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 BEX4Q9NWD9 120 aaPredicted RBP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 FAF1Q9UNN5 650 aaPredicted RBP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 CARD8Q9Y2G2 431 aa17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 V9GYY5 206 aaPredicted RBP17.02■□□□□ 0.32
TM6SF1-201ENST00000258909 C7orf72A4D263 438 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ADAMDEC1O15204 470 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 TYROBPO43914 113 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 NUDT14O95848 222 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 LINGO3P0C6S8 592 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 G6PDP11413 515 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ME2P23368 584 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 SERPINB5P36952 375 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 NKX6-1P78426 367 aaPredicted RBP17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 DCST2Q5T1A1 773 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ESPNLQ6ZVH7 1005 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 HOMEZQ8IX15 550 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 RIMKLAQ8IXN7 391 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 CLEC4FQ8N1N0 589 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 OR56A1Q8NGH5 318 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 OR6K3Q8NGY3 331 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 PSMA8Q8TAA3 256 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ROBO4Q8WZ75 1007 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 OSTF1Q92882 214 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 GMPPAQ96IJ6 420 aaPredicted RBP17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 HHATLQ9HCP6 504 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ATAD3AQ9NVI7 634 aa17.01■□□□□ 0.31
TM6SF1-201ENST00000258909 ITM2AO43736 263 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 EFNA2O43921 213 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 SS18L1O75177 396 aaPredicted RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 HSPA4LO95757 839 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 ETV4P43268 484 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 RPS26P62854 115 aaKnown RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 TOMM34Q15785 309 aaPredicted RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 PGS1Q32NB8 556 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 LSM12Q3MHD2 195 aaKnown RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 KLHL26Q53HC5 615 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 NUDCD3Q8IVD9 361 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF614Q8N883 585 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 OR5D16Q8NGK9 328 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 MARK4Q96L34 752 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 KLHL15Q96M94 604 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 PRPF18Q99633 342 aaKnown RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 DUSP26Q9BV47 211 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 C12orf49Q9H741 205 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 PAQR5Q9NXK6 330 aaPredicted RBP17■□□□□ 0.31
TM6SF1-201ENST00000258909 DSCAMO60469 2012 aa17■□□□□ 0.31
TM6SF1-201ENST00000258909 THBDP07204 575 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 PRPS1L1P21108 318 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 SOAT1P35610 550 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 CARD18P57730 90 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 HBA1P69905 142 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ATP6V1C2Q8NEY4 427 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 RFWD2Q8NHY2 731 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 FBXO27Q8NI29 283 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 PPP1R14CQ8TAE6 165 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF524Q96C55 264 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 OR7D2Q96RA2 312 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ICAM5Q9UMF0 924 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 GTPBP1O00178 669 aaKnown RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 NTN1O95631 604 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 FOSL1P15407 271 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 HOXB4P17483 251 aaPredicted RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 LOXP28300 417 aaPredicted RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 PDCD2Q16342 344 aaPredicted RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ACKR1Q16570 336 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 PDSS1Q5T2R2 415 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 EMBQ6PCB8 327 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 STAC2Q6ZMT1 411 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 Q71RC1 249 aaPredicted RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 OLIG3Q7RTU3 272 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 CLECL1Q8IZS7 167 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ZNF527Q8NB42 609 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 CAVIN3Q969G5 261 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 ARSGQ96EG1 525 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 SRXN1Q9BYN0 137 aa16.99■□□□□ 0.31
TM6SF1-201ENST00000258909 BHLHE41Q9C0J9 482 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms