RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 COL2A1P02458 1487 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 C2orf78A6NCI8 922 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM200CA6NKL6 621 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 F8VP50 259 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 VNN1O95497 513 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 LSM8O95777 96 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 JCHAINP01591 159 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 CEBPBP17676 345 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 BMP5P22003 454 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 GIFP27352 417 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 SERPINA4P29622 427 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 EIF1AXP47813 144 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 CLCN3P51790 818 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 SUCLG1P53597 346 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 IRF8Q02556 426 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 TPGS2Q68CL5 300 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2A2Q6IF42 318 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 MED27Q6P2C8 311 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 HACD2Q6Y1H2 254 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF467Q7Z7K2 595 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 FAM58AQ8N1B3 248 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 GPR119Q8TDV5 335 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 SELENOMQ8WWX9 145 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 KCTD13Q8WZ19 329 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 PSMF1Q92530 271 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 POLDIP3Q9BY77 421 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 TM7SF3Q9NS93 570 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 TDP1Q9NUW8 608 aa6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 EXO1Q9UQ84 846 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-201ENST00000257290 WDR27A2RRH5 827 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 INHBBP09529 407 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TYRP1P17643 537 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 RAB5AP20339 215 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GABRR1P24046 479 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 EPHA2P29317 976 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CPOXP36551 454 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 BCAT1P54687 386 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NSUN5P2Q63ZY6 315 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 DOK6Q6PKX4 331 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 IQCF1Q8N6M8 205 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 BCL2L2Q92843 193 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 RAB8BQ92930 207 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LRRC58Q96CX6 371 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 DNAJC19Q96DA6 116 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC22A12Q96S37 553 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GATA5Q9BWX5 397 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 RNF19AQ9NV58 838 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 COQ4Q9Y3A0 265 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 KLK4Q9Y5K2 254 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 NHSQ6T4R5 1651 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 PAPPAQ13219 1627 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TRBV11-1A0A0K0K1C0 115 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TCRBV3S1A0A5B6 114 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 FZD9O00144 591 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TGFB1I1O43294 461 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CACNG3O60359 315 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 WDR1O75083 606 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 APOA2P02652 100 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GP1BAP07359 652 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CSF3P09919 207 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF286BP0CG31 522 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ITGAMP11215 1152 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ETFAP13804 333 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 POLR2JP52435 117 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 AQP6Q13520 282 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SSPNQ14714 243 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 MFSD10Q14728 455 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GOLGA7BQ2TAP0 167 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 EML3Q32P44 896 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LIPKQ5VXJ0 399 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 C10orf71Q711Q0 1435 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 APTXQ7Z2E3 356 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 BAP18Q8IXM2 172 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC35G3Q8N808 338 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 BHLHE23Q8NDY6 225 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LKAAEAR1Q8TD35 194 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 MFSD14AQ96MC6 490 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 FZD1Q9UP38 647 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ADAMTS7Q9UKP4 1686 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TRAV34A0A0B4J273 112 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 GLTPD2A6NH11 291 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 BLOC1S5-TXNDC5H3BN57 136 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC33A1O00400 549 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 ARPC1BO15143 372 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 RECQL4O94761 1208 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 CPSF4O95639 269 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 IL3P08700 152 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 AKR1A1P14550 325 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 C22orf42Q6IC83 251 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 KCNIP4Q6PIL6 250 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 IL34Q6ZMJ4 242 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 LRRTM1Q86UE6 522 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 FAM71AQ8IYT1 594 aa6.36□□□□□ -1.39
PDGFRA-201ENST00000257290 OR6X1Q8NH79 312 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms