RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C9orf16Q9BUW7 83 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 VCXQ9H320 206 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 REEP1Q9H902 201 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 LIN28AQ9H9Z2 209 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 NTN4Q9HB63 628 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 HPF1Q9NWY4 346 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 NPIPA5A0A0B4J1W7 369 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 CENPVL1A0A0U1RR11 272 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 HTR3EA5X5Y0 456 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 NPIPA7E9PJI5 369 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 hCG_2039718K7EN88 272 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 NKX2-8O15522 239 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 RRP8O43159 456 aaKnown RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 KLK10O43240 276 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 TLX3O43711 291 aaPredicted RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 SNX4O95219 450 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 NPIPA8P0DM63 369 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 ITGA3P26006 1051 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 CASRP41180 1078 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 CYB561P49447 251 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 GAS1P54826 345 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 UCNP55089 124 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 FBXW4P57775 412 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 SKP2Q13309 424 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 AGAP7PQ5VUJ5 663 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 SLC22A10Q63ZE4 541 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 HMBOX1Q6NT76 420 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 SHQ1Q6PI26 577 aaKnown RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 APOOLQ6UXV4 268 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 C16orf47Q6ZP98 133 aaPredicted RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 OR4D11Q8NGI4 311 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 OR5W2Q8NH69 310 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 OR5K1Q8NHB7 308 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 PHOSPHO1Q8TCT1 267 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 GRHL3Q8TE85 626 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 DNAJA4Q8WW22 397 aaPredicted RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 CNOT9Q92600 299 aaKnown RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 SDCCAG3Q96C92 435 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 MPP4Q96JB8 637 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 AGAP4Q96P64 663 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 MCHR1Q99705 422 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 PSD2Q9BQI7 771 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 ING2Q9H160 280 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 NMNAT1Q9HAN9 279 aaPredicted RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 C12orf10Q9HB07 376 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 TMEM27Q9HBJ8 222 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 STMN3Q9NZ72 180 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 A4GNTQ9UNA3 340 aa11.85□□□□□ -0.51
LSM8-201ENST00000249299 CHCHD2Q9Y6H1 151 aaPredicted RBP11.85□□□□□ -0.51
LSM8-201ENST00000249299 CCDC88CQ9P219 2028 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 TRAPPC13A5PLN9 417 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 CLDN24A6NM45 220 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 M0R3H8 397 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 OR6B1O95007 311 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 H1F0P07305 194 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 SPINK2P20155 84 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 VHLP40337 213 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 EIF2S3P41091 472 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 CASP3P42574 277 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 LIMS1P48059 325 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 PTDSS1P48651 473 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 P2RX1P51575 399 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 DLX5P56178 289 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 COPZ1P61923 177 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 PLAURQ03405 335 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 EPS8Q12929 822 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 TRIP10Q15642 601 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 CD226Q15762 336 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 NPTX1Q15818 432 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 PPP4R4Q6NUP7 873 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 ISLR2Q6UXK2 745 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 DNAJC9Q8WXX5 260 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 EME1Q96AY2 570 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 NODALQ96S42 347 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 UTP23Q9BRU9 249 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 FNDC11Q9BVV2 318 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 ANGPTL4Q9BY76 406 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 METTL7AQ9H8H3 244 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
LSM8-201ENST00000249299 LYVE1Q9Y5Y7 322 aa11.84□□□□□ -0.51
LSM8-201ENST00000249299 G3V2T6 193 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 TNFRSF11BO00300 401 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 ADAM10O14672 748 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 FFAR1O14842 300 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 EFSO43281 561 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 SEMA7AO75326 666 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 E2F6O75461 281 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 CEACAM4O75871 244 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 GADD45GO95257 159 aa11.83□□□□□ -0.52
LSM8-201ENST00000249299 HPRP00739 348 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms