RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 VSX2P58304 361 aaPredicted RBP11.78□□□□□ -0.52
SNAI1-201ENST00000244050 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 TPBGQ13641 420 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 STEAP3Q658P3 488 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 ZNF620Q6ZNG0 422 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 RANBP3LQ86VV4 465 aaPredicted RBP11.78□□□□□ -0.52
SNAI1-201ENST00000244050 C17orf82Q86X59 251 aaPredicted RBP11.78□□□□□ -0.52
SNAI1-201ENST00000244050 MEX3DQ86XN8 651 aaKnown RBP11.78□□□□□ -0.52
SNAI1-201ENST00000244050 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 RNF113BQ8IZP6 322 aaKnown RBP11.78□□□□□ -0.52
SNAI1-201ENST00000244050 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 RFKQ969G6 155 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 CTHRC1Q96CG8 243 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 EVA1AQ9H8M9 152 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 POLE3Q9NRF9 147 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 PCDHGB6Q9Y5F9 930 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
SNAI1-201ENST00000244050 TNRC6BQ9UPQ9 1833 aaKnown RBP11.77□□□□□ -0.52
SNAI1-201ENST00000244050 USP24Q9UPU5 2620 aa11.77□□□□□ -0.52
SNAI1-201ENST00000244050 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 RHPN2P1A8MT19 583 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 CTDSP2O14595 271 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 TM4SF5O14894 197 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 SOX30O94993 753 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 NTN1O95631 604 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 HMGN1P05114 100 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 NID1P14543 1247 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 COPZ1P61923 177 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 ID2Q02363 134 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 MGAT2Q10469 447 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 KRR1Q13601 381 aaKnown RBP11.77□□□□□ -0.53
SNAI1-201ENST00000244050 DEFB110Q30KQ9 67 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 PGGHGQ32M88 737 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 PLK5Q496M5 336 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 FLYWCH1Q4VC44 716 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 DCST2Q5T1A1 773 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 LIPKQ5VXJ0 399 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 OGFOD3Q6PK18 319 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 LAPTM4BQ86VI4 370 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 CADM3Q8N126 398 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 CSNK1A1LQ8N752 337 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 HOXB13Q92826 284 aaPredicted RBP11.77□□□□□ -0.53
SNAI1-201ENST00000244050 TRMT61AQ96FX7 289 aaKnown RBP11.77□□□□□ -0.53
SNAI1-201ENST00000244050 MAP3K3Q99759 626 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 CCDC32Q9BV29 185 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 ERVMER34-1Q9H9K5 563 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 SMURF1Q9HCE7 757 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 FAM60AQ9NP50 221 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 ADAP2Q9NPF8 381 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 MAT2BQ9NZL9 334 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 SLC7A7Q9UM01 511 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 TRAPPC4Q9Y296 219 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 EXOGQ9Y2C4 368 aaKnown RBP11.77□□□□□ -0.53
SNAI1-201ENST00000244050 GPR52Q9Y2T5 361 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 LAMA1P25391 3075 aa11.77□□□□□ -0.53
SNAI1-201ENST00000244050 SDK1Q7Z5N4 2213 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 MN1Q10571 1320 aaPredicted RBP11.76□□□□□ -0.53
SNAI1-201ENST00000244050 CNOT1A5YKK6 2376 aaKnown RBP11.76□□□□□ -0.53
SNAI1-201ENST00000244050 CENPVL1A0A0U1RR11 272 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 SLC35F4A4IF30 521 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 SLC9B1P1A6NJY1 282 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 WWP2O00308 870 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 LDB3O75112 727 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 PTTG1O95997 202 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 IL1AP01583 271 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 NT5EP21589 574 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 CDH11P55287 796 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 RAB38P57729 211 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 SF3A2Q15428 464 aaKnown RBP11.76□□□□□ -0.53
SNAI1-201ENST00000244050 GPR68Q15743 365 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 MAPK14Q16539 360 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 CLEC12AQ5QGZ9 265 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 CCNJQ5T5M9 372 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 NXNL2Q5VZ03 156 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 PMS2CLQ68D20 193 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 COX18Q8N8Q8 333 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 ZNF485Q8NCK3 441 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 TMEM52Q8NDY8 209 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 OR2T33Q8NG76 320 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 BRIX1Q8TDN6 353 aaKnown RBP11.76□□□□□ -0.53
SNAI1-201ENST00000244050 ANKRD9Q96BM1 317 aaPredicted RBP11.76□□□□□ -0.53
SNAI1-201ENST00000244050 WDFY2Q96P53 400 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 KCNS3Q9BQ31 491 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 SLC30A2Q9BRI3 323 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 ARHGAP9Q9BRR9 750 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 MED18Q9BUE0 208 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 JAM3Q9BX67 310 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 BARHL1Q9BZE3 327 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 STARD5Q9NSY2 213 aa11.76□□□□□ -0.53
SNAI1-201ENST00000244050 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms