RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 NPY5RQ15761 445 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 STEAP3Q658P3 488 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 OR6V1Q8N148 313 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 CLEC4DQ8WXI8 215 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 KLRG1Q96E93 195 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 L3HYPDHQ96EM0 354 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SUSD3Q96L08 255 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 ARPC5LQ9BPX5 153 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 DCAF13Q9NV06 445 aaKnown RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 POLHQ9Y253 713 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SMPD1P17405 629 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SYN1P17600 705 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RPS18P62269 152 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 DUSP6Q16828 381 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PDLIM3Q53GG5 364 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 GLB1L2Q8IW92 636 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RPL3LQ92901 407 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 IL17FQ96PD4 163 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SMOQ99835 787 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 NIPSNAP3BQ9BS92 247 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RBFOX1Q9NWB1 397 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ARHGAP23Q9P227 1491 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 MSTNO14793 375 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PSMB1P20618 241 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ERVPABLB-1P60509 514 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PRPS1P60891 318 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 TCEAL1Q15170 157 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PSAPL1Q6NUJ1 521 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 TSTD1Q8NFU3 115 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 GPR88Q9GZN0 384 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SLC7A7Q9UM01 511 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ANKRD34BA5PLL1 514 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 FTCDNL1E5RQL4 147 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 HBE1P02100 147 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 FAM163BP0C2L3 166 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 CNR1P21554 472 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 HNF1BP35680 557 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 MLLT11Q13015 90 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RBMS3Q6XE24 437 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF100Q8IYN0 542 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 LRRC46Q96FV0 321 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 DEFB126Q9BYW3 111 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 TMEM82A0PJX8 343 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 FEZF1A0PJY2 475 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SOCS5O75159 536 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ELNP15502 786 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ETV3P41162 512 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SPOCK1Q08629 439 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PLGLAQ15195 96 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-201ENST00000240185 OR4C11Q6IEV9 310 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 OR10K2Q6IF99 312 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 RNF170Q96K19 258 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 C4orf36Q96KX1 117 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 DPH7Q9BTV6 452 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
TARDBP-201ENST00000240185 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 H0Y8G0 127 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 CFIP05156 583 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ITGAMP11215 1152 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 KCNE1P15382 129 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 PKLRP30613 574 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 VEZF1Q14119 521 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 UPP1Q16831 310 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF691Q5VV52 312 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 STEAP4Q687X5 459 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-201ENST00000240185 MYO10Q9HD67 2058 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ANKRD26Q9UPS8 1709 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 NFKBIEO00221 500 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ADAM12O43184 909 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RAB40ALP0C0E4 278 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 GABRR1P24046 479 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 ETV6P41212 452 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 BDH1Q02338 343 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■□□□□ 10.8
TARDBP-201ENST00000240185 NADSYN1Q6IA69 706 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
TARDBP-201ENST00000240185 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms