RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CRTC2Q53ET0 693 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 MEPCEQ7L2J0 689 aaKnown RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 C11orf74Q86VG3 221 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ZNF761Q86XN6 746 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CDK20Q8IZL9 346 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 BBS1Q8NFJ9 593 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 PFN4Q8NHR9 129 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 FANK1Q8TC84 345 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CHAC2Q8WUX2 184 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 HTRA1Q92743 480 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 KLHDC7BQ96G42 594 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 TXNDC15Q96J42 360 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ZNF426Q9BUY5 554 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 KATNB1Q9BVA0 655 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 GPR174Q9BXC1 333 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 C20orf141Q9NUB4 165 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ASB6Q9NWX5 421 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 TNFRSF10DQ9UBN6 386 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SIGLEC7Q9Y286 467 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 YARS2Q9Y2Z4 477 aaKnown RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 MED31Q9Y3C7 131 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 A0A0B4J2E0 115 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 A0A1B0GX12 115 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 OR10H2O60403 315 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CTNSO60931 367 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 PTP4A3O75365 173 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CTSBP07858 339 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SDC2P34741 201 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CD79BP40259 229 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 EMDP50402 254 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SKP1P63208 163 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 FABP5Q01469 135 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 C1orf61Q13536 156 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SYT13Q7L8C5 426 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ZAR1Q86SH2 424 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 LAX1Q8IWV1 398 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SLC43A2Q8N370 569 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 LSMEM1Q8N8F7 131 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 AVL9Q8NBF6 648 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 RNF217Q8TC41 542 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 TMCO6Q96DC7 493 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 BPIFA2Q96DR5 249 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ZNF285Q96NJ3 590 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 SECISBP2Q96T21 854 aaKnown RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 GAS2L1Q99501 681 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-201ENST00000237186 TM9SF2Q99805 663 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 LRRC61Q9BV99 259 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CHRDQ9H2X0 955 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 TPK1Q9H3S4 243 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 UCK1Q9HA47 277 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 ATP13A2Q9NQ11 1180 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CMC2Q9NRP2 79 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 IL20RAQ9UHF4 553 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 MUTYHQ9UIF7 546 aa14.97□□□□□ -0.01
UBE3D-201ENST00000237186 CHURC1-FNTBB4DL54 471 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 SOCS6O14544 535 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 CHP2O43745 196 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 DLGAP3O95886 979 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 APOA1P02647 267 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 HLA-DPB1P04440 258 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 CLEC2LP0C7M8 214 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 RNH1P13489 461 aaKnown RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 RBM34P42696 430 aaKnown RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 FASLGP48023 281 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 RNF144AP50876 292 aaPredicted RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 CD300CQ08708 224 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 LRIT3Q3SXY7 679 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 NIPAL3Q6P499 406 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 ZNF322Q6U7Q0 402 aaPredicted RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 CCBE1Q6UXH8 406 aaPredicted RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 Q6ZS52 159 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 ZNF595Q8IYB9 648 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 ADAMTS18Q8TE60 1221 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 AP3S1Q92572 193 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 VSTM2LQ96N03 204 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 TRIM2Q9C040 744 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 SRRQ9GZT4 340 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 ENKD1Q9H0I2 346 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 MIXL1Q9H2W2 232 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 FOLH1BQ9HBA9 442 aa14.96□□□□□ -0.01
UBE3D-201ENST00000237186 MEPEQ9NQ76 525 aaPredicted RBP14.96□□□□□ -0.01
UBE3D-201ENST00000237186 TNRC18O15417 2968 aaPredicted RBP14.96□□□□□ -0.02
UBE3D-201ENST00000237186 EYSQ5T1H1 3165 aa14.96□□□□□ -0.02
UBE3D-201ENST00000237186 TMEM265A0A087WTH1 108 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FAM86C2PA6NEL3 165 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FOXS1O43638 330 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 IMPDH2P12268 514 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 SPNP16150 400 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ACAA2P42765 397 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 TGM4P49221 684 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 MXD1Q05195 221 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 HNRNPA0Q13151 305 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 FAM53BQ14153 422 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ZNHIT3Q15649 155 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF141Q15928 474 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF79Q15937 498 aa14.95□□□□□ -0.02
UBE3D-201ENST00000237186 GLYR1Q49A26 553 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 PRPF38BQ5VTL8 546 aaKnown RBP14.95□□□□□ -0.02
UBE3D-201ENST00000237186 DESI1Q6ICB0 168 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms