RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PLPP4Q5VZY2 271 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 C3P1Q6ZMU1 363 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF730Q6ZMV8 503 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF600Q6ZNG1 722 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 GPAT4Q86UL3 456 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 AMZ2Q86W34 360 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 NUDT13Q86X67 352 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 CCDC116Q8IYX3 515 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 SAMD12Q8N8I0 201 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 LINC00615Q96LM1 132 aaPredicted RBP8.78□□□□□ -1
HLA-DOA-201ENST00000229829 NPAS1Q99742 590 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 CACNG6Q9BXT2 260 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 GSDMCQ9BYG8 508 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 MAFFQ9ULX9 164 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 ZFR2Q9UPR6 939 aaKnown RBP8.78□□□□□ -1
HLA-DOA-201ENST00000229829 SCN2AQ99250 2005 aa8.78□□□□□ -1
HLA-DOA-201ENST00000229829 RPS10-NUDT3A0A1W2PQS6 291 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ARPC5O15511 151 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 PROM1O43490 865 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 LANCL1O43813 399 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF254O75437 659 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SPDEFO95238 335 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 LGI1O95970 557 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ACP2P11117 423 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ADRB3P13945 408 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 MTNR1AP48039 350 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ST8SIA6P61647 398 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 OPCMLQ14982 345 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF628Q5EBL2 1059 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 C9orf64Q5T6V5 341 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC30A6Q6NXT4 461 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZCCHC12Q6PEW1 402 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ADGRG3Q86Y34 549 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 DCUN1D3Q8IWE4 304 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 CLDN22Q8N7P3 220 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SENP5Q96HI0 755 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 FAM46AQ96IP4 442 aaKnown RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 LRIG1Q96JA1 1093 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 TRMT61BQ9BVS5 477 aaKnown RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 PTGFRNQ9P2B2 879 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 IGKV1-8A0A0C4DH67 115 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 CPSF4LA6NMK7 179 aaKnown RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 BET1O15155 118 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 HCN1O60741 890 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RB1P06400 928 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 CCR8P51685 355 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SF3A2Q15428 464 aaKnown RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 GRASPQ7Z6J2 395 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 VRK2Q86Y07 508 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 IL17RCQ8NAC3 791 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RELL2Q8NC24 303 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 NEIL3Q8TAT5 605 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 TMEM163Q8TC26 289 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RGMAQ96B86 450 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ARL6Q9H0F7 186 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 CD93Q9NPY3 652 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 EQTNQ9NQ60 294 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 NLGN3Q9NZ94 848 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 GPR34Q9UPC5 381 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ATG2BQ96BY7 2078 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 F8W036 122 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 PRODHO43272 600 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC2A10O95528 541 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 MT-ND4P03905 459 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 LPLP06858 475 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 LINC00271P0C7V0 271 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 TRHRP34981 398 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SSR2P43308 183 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SMIM11AP58511 58 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ADAM15Q13444 863 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 TPBGQ13641 420 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RIN1Q13671 783 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF791Q3KP31 576 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 C3orf38Q5JPI3 329 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ENTPD8Q5MY95 495 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 COL13A1Q5TAT6 717 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR4C11Q6IEV9 310 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 KIAA1161Q6NSJ0 714 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 QSOX2Q6ZRP7 698 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 BBS1Q8NFJ9 593 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZFPM2Q8WW38 1151 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RFT1Q96AA3 541 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 RSPRY1Q96DX4 576 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF578Q96N58 590 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 TBX5Q99593 518 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SYNPO2LQ9H987 977 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZFP64Q9NPA5 681 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC22A11Q9NSA0 550 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 SEMA4GQ9NTN9 838 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 CHST2Q9Y4C5 530 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 IRAK3Q9Y616 596 aa8.77□□□□□ -1.01
HLA-DOA-201ENST00000229829 A0A1W2PPK0 400 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 SCAMP1O15126 338 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TBX19O60806 448 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PTP4A3O75365 173 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR5F1O95221 314 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PCCBP05166 539 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PPP2R1BP30154 601 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 VIPR2P41587 438 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms