RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 WASH4PA8MWX3 477 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SLC31A1O15431 190 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SIX6O95475 246 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 IL13RA1P78552 427 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CTSL3PQ5NE16 218 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 DUSP19Q8WTR2 217 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 DPEP2Q9H4A9 486 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 LTB4R2Q9NPC1 389 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 NIT2Q9NQR4 276 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 C5AR2Q9P296 337 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 GOLGA4Q13439 2230 aaKnown RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF623O75123 536 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 CSTAP01040 98 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 CLUP10909 449 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ARRB2P32121 409 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 AHRP35869 848 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SEC13P55735 322 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GPR176Q14439 515 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SAXO2Q658L1 398 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 LEG1Q6P5S2 330 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OR5H2Q8NGV7 314 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 PRRT1Q99946 306 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 PNO1Q9NRX1 252 aaKnown RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GGT3PA6NGU5 568 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 C11orf98E9PRG8 122 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 I6L893 689 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GALTP07902 379 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SGSHP51688 502 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OC90Q02509 493 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GPM6BQ13491 265 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ALG10Q5BKT4 473 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 TERB2Q8NHR7 220 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 IL26Q9NPH9 171 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 PLCXD1Q9NUJ7 323 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 FEZF1A0PJY2 475 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 MROH6A6NGR9 719 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ARAFP10398 606 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 TACR1P25103 407 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SOX9P48436 509 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 PIP5KL1Q5T9C9 394 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GPR26Q8NDV2 337 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OR52I1Q8NGK6 324 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 C1QTNF2Q9BXJ5 285 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GPX5O75715 221 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 FBXO45P0C2W1 286 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GNRHRP30968 328 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 IDH3GP51553 393 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 MEF2DQ14814 521 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM35AQ53FP2 167 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 FCRLAQ7L513 359 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 SSX9Q7RTT3 188 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 RIMKLAQ8IXN7 391 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OR4E2Q8NGC2 313 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 OR2T4Q8NH00 348 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ACOT11Q8WXI4 607 aaPredicted RBP12.99□□□□□ -0.33
HCFC2-201ENST00000229330 AP1S3Q96PC3 154 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 RBP7Q96R05 134 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 DOK1Q99704 481 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 GABARAPL1Q9H0R8 117 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF226Q9NYT6 803 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 INSL5Q9Y5Q6 135 aa12.99□□□□□ -0.33
HCFC2-201ENST00000229330 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SOX1O00570 391 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 FRS3O43559 492 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ACTR1BP42025 376 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ACTR1AP61163 376 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 NKX3-2P78367 333 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 IRF4Q15306 451 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ANKRD53Q8N9V6 530 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 IL17RDQ8NFM7 739 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 OR4M1Q8NGD0 313 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 OR8J2Q8NGG1 315 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 C10orf90Q96M02 699 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ACTRT3Q9BYD9 372 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 AK1P00568 194 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SOD2P04179 222 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ADRB1P08588 477 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 PIM1P11309 404 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 SYN1P17600 705 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 PSMB10P40306 273 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 CD300CQ08708 224 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 HSF5Q4G112 596 aaPredicted RBP12.98□□□□□ -0.33
HCFC2-201ENST00000229330 GAREM2Q75VX8 874 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
HCFC2-201ENST00000229330 HAVCR2Q8TDQ0 301 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms