RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ZNF701M0R085 212 aaPredicted RBP9.27□□□□□ -0.93
USP11-201ENST00000218348 SLC2A10O95528 541 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 TGFBR2P37173 567 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 SLC16A1P53985 500 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 GFERP55789 205 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 IFITM3Q01628 133 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 ENTPD8Q5MY95 495 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 SYT6Q5T7P8 510 aaPredicted RBP9.27□□□□□ -0.93
USP11-201ENST00000218348 CYB5R2Q6BCY4 276 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 MFSD12Q6NUT3 480 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 TRIM69Q86WT6 500 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 COX18Q8N8Q8 333 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 YIPF6Q96EC8 236 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 KCNS3Q9BQ31 491 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 CNPPD1Q9BV87 410 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 TSSK6Q9BXA6 273 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 ACTRT3Q9BYD9 372 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 GSDMCQ9BYG8 508 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 GPN2Q9H9Y4 310 aaPredicted RBP9.27□□□□□ -0.93
USP11-201ENST00000218348 CCNB1IP1Q9NPC3 277 aa9.27□□□□□ -0.93
USP11-201ENST00000218348 SPTY2D1-AS1A0A0U1RR47 76 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 ZC3H12DA2A288 527 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 AP3D1O14617 1153 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CCNKO75909 580 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MED26O95402 600 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 ACP2P11117 423 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 GNSP15586 552 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 SSTR4P31391 388 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CSNK1EP49674 416 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 HMGA2P52926 109 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CXCR4P61073 352 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 TRA2BP62995 288 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 BTG2P78543 158 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 NDUFAF6Q330K2 333 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 OR2G6Q5TZ20 316 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 KIAA0895LQ68EN5 471 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 GATSQ8NAP1 163 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 PSMA8Q8TAA3 256 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 SMAP2Q8WU79 429 aaPredicted RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 RADILQ96JH8 1075 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 TBX5Q99593 518 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 TTYH2Q9BSA4 534 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 LRRC61Q9BV99 259 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 TTTY10Q9BZA0 68 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 PAQR5Q9NXK6 330 aaPredicted RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 NDOR1Q9UHB4 597 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 SLC7A7Q9UM01 511 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 HSPE1-MOB4S4R3N1 261 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 FAAHO00519 579 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 SERPINI2O75830 405 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 GABARAPO95166 117 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 GABRB1P18505 474 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 RABIFP47224 123 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CSTF1Q05048 431 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 ZNF155Q12901 538 aaPredicted RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 ABHD13Q7L211 337 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CDH24Q86UP0 819 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 LHFPL3Q86UP9 236 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 KIF18BQ86Y91 864 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MCFD2Q8NI22 146 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 BBS10Q8TAM1 723 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MGLLQ99685 303 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 KCND3Q9UK17 655 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 WBP11Q9Y2W2 641 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 YARS2Q9Y2Z4 477 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 CSNK1G3Q9Y6M4 447 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 ADAP00813 363 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MAOAP21397 527 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MAJINQ3KP22 176 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 LIPKQ5VXJ0 399 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 POMZP3Q6PJE2 187 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 OR8D4Q8NGM9 314 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 BAHD1Q8TBE0 780 aaPredicted RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 TRUB1Q8WWH5 349 aaKnown RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 SLC38A4Q969I6 547 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 SH3YL1Q96HL8 342 aaPredicted RBP9.26□□□□□ -0.93
USP11-201ENST00000218348 PTCHD1Q96NR3 888 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MED20Q9H944 212 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 ABCB10Q9NRK6 738 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 FBXL21Q9UKT6 434 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 MGAT4BQ9UQ53 548 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 CACNG2Q9Y698 323 aa9.26□□□□□ -0.93
USP11-201ENST00000218348 IGHV1OR15-9A0A0B4J2B8 117 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 CCDC163A0A0D9SF12 145 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 TOR1AO14656 332 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 TBX19O60806 448 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 WNT1P04628 370 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 IFNA16P05015 189 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 HEXBP07686 556 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 ATP6V1E1P36543 226 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 GIPRP48546 466 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 ANXA11P50995 505 aaKnown RBP9.25□□□□□ -0.93
USP11-201ENST00000218348 ZNF91Q05481 1191 aa9.25□□□□□ -0.93
USP11-201ENST00000218348 FRRS1Q6ZNA5 592 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms