RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 WDR5P61964 334 aaKnown RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 ADARB1P78563 741 aaKnown RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 ZNF252P-AS1Q0IIN9 211 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 CPZQ66K79 652 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SUSD1Q6UWL2 747 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 GRASPQ7Z6J2 395 aaPredicted RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 SIAH3Q8IW03 269 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 NRMQ8IXM6 262 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 CCDC116Q8IYX3 515 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SLC30A7Q8NEW0 376 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 BBS1Q8NFJ9 593 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 AKR7LQ8NHP1 331 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FUBP1Q96AE4 644 aaKnown RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 SEC22AQ96IW7 307 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 KLRF1Q9NZS2 232 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SLAMF8Q9P0V8 285 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ABRACLQ9P1F3 81 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 TAS2R20P59543 309 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 BTG1P62324 171 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 VEZF1Q14119 521 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 RSU1Q15404 277 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 OR4D6Q8NGJ1 314 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 OR4K13Q8NH42 304 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 LINC01599Q8WXQ3 324 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 IGSF21Q96ID5 467 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 DDOQ99489 341 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 PRRT1Q99946 306 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 NELFAQ9H3P2 528 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 HHATLQ9HCP6 504 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 PCDHA9Q9Y5H5 950 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CACNA1FO60840 1977 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 PHLPP1O60346 1717 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 RNF13O43567 381 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 VEGFDO43915 354 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 HNRNPA1P09651 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
VCL-201ENST00000211998 H2BFMP0C1H6 154 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ETV6P41212 452 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CXADRP78310 365 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ASAH1Q13510 395 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 PIN1Q13526 163 aaPredicted RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 RPS26P11Q5JNZ5 115 aaPredicted RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 CTU1Q7Z7A3 348 aaKnown RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 TMEM156Q8N614 296 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 OR5M11Q96RB7 305 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CNIH4Q9P003 139 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 NDRG3Q9UGV2 375 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ROBO1Q9Y6N7 1651 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CPNE6O95741 557 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 GP1BBP13224 206 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 GKP32189 559 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CSNK2A1P68400 391 aaPredicted RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 TLE3Q04726 772 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 RBMS2Q15434 407 aaKnown RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 FRMPD2BQ6IN97 320 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 LETMD1Q6P1Q0 360 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 DHRS4L2Q6PKH6 230 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 SERPINA11Q86U17 422 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 LILRB2Q8N423 598 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 GPR26Q8NDV2 337 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CSNK2A3Q8NEV1 391 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 FNDC9Q8TBE3 224 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 RNF32Q9H0A6 362 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 DDX31Q9H8H2 851 aaKnown RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 REV1Q9UBZ9 1251 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ZNF629Q9UEG4 869 aaPredicted RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 ALDOCP09972 364 aaKnown RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 CLEC2LP0C7M8 214 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 PCGF2P35227 344 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 HNF1BP35680 557 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ACY1Q03154 408 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ZNF91Q05481 1191 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CLEC9AQ6UXN8 241 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 B3GLCTQ6Y288 498 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.85□□□□□ -0.83
VCL-201ENST00000211998 MAVSQ7Z434 540 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 CD163Q86VB7 1156 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 GLB1L2Q8IW92 636 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 LMX1AQ8TE12 382 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 RAB39BQ96DA2 213 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 ENY2Q9NPA8 101 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 B4GALT6Q9UBX8 382 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 SIX4Q9UIU6 781 aa9.85□□□□□ -0.83
VCL-201ENST00000211998 LTN1O94822 1766 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 AGAP14A8MT82 685 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 CRTAPO75718 401 aaPredicted RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 MPC1LP0DKB6 136 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 GABRA5P31644 462 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 GP2P55259 537 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 RBM39Q14498 530 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 UGT3A2Q3SY77 523 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PLK5Q496M5 336 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 LY6G5CQ5SRR4 150 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 FCRLBQ6BAA4 426 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 KLHDC7BQ96G42 594 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 C20orf24Q9BUV8 137 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 XYLT2Q9H1B5 865 aa9.84□□□□□ -0.83
VCL-201ENST00000211998 PATZ1Q9HBE1 687 aaKnown RBP9.84□□□□□ -0.83
VCL-201ENST00000211998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms