RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 UBXN7O94888 489 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 CPMP14384 443 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 TLX1P31314 330 aaPredicted RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 OMPP47874 163 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 CSTF1Q05048 431 aaKnown RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 ILF3Q12906 894 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTNS-201ENST00000046640 PLK5Q496M5 336 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 GNPDA2Q8TDQ7 276 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 MOAP1Q96BY2 351 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 SAMD8Q96LT4 415 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 MS4A4EQ96PG1 132 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ARHGDIGQ99819 225 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 SARGQ9BW04 601 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 DPH1Q9BZG8 443 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 ENKD1Q9H0I2 346 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 TRIM45Q9H8W5 580 aaPredicted RBP12.21□□□□□ -0.45
CTNS-201ENST00000046640 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 MCUBQ9NWR8 336 aa12.21□□□□□ -0.45
CTNS-201ENST00000046640 CT62P0C5K7 136 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 NDUFS1P28331 727 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 RPS5P46782 204 aaKnown RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 PEX5LQ8IYB4 626 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SIX5Q8N196 739 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SLC22A18ASQ8N1D0 253 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 TMEM163Q8TC26 289 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SLC22A18Q96BI1 424 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 MSLNLQ96KJ4 702 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SDF2Q99470 211 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 CPNE7Q9UBL6 633 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 TESQ9UGI8 421 aaKnown RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 LIPT1Q9Y234 373 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 HSPB11Q9Y547 144 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 FANCMQ8IYD8 2048 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 MEN1O00255 615 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 PRKNO60260 465 aaPredicted RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 ALX3O95076 343 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 CDH11P55287 796 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 KIAA1024LP59773 190 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 TSPAN31Q12999 210 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 ADAM15Q13444 863 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 HTR4Q13639 388 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 NNATQ16517 81 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 TAF8Q7Z7C8 310 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 ZAR1Q86SH2 424 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 KLBQ86Z14 1044 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 FAM160A2Q8N612 972 aaPredicted RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 PFN4Q8NHR9 129 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SMAP2Q8WU79 429 aaPredicted RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SENP5Q96HI0 755 aaPredicted RBP12.2□□□□□ -0.46
CTNS-201ENST00000046640 SERINC2Q96SA4 455 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 ZFYVE21Q9BQ24 234 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 LMAN2LQ9H0V9 348 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 TEKT2Q9UIF3 430 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 KCNE5Q9UJ90 142 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 A6NCN8 305 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SOCS6O14544 535 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GNB5O14775 395 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 LIMS3P0CW19 117 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 LIMS4P0CW20 117 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GABRG2P18507 467 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GSTM3P21266 225 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 IFNA8P32881 189 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 FAPQ12884 760 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 ERV3-1Q14264 604 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 KIR2DS3Q14952 304 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 NDUFA9Q16795 377 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 KLHL22Q53GT1 634 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 IDNKQ5T6J7 187 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SLC36A4Q6YBV0 504 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 WDR88Q6ZMY6 472 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 Q6ZS52 159 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 GRHL3Q8TE85 626 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 FAM60AQ9NP50 221 aa12.2□□□□□ -0.46
CTNS-201ENST00000046640 A0A0X1KG70 313 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
CTNS-201ENST00000046640 DUXAA6NLW8 204 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 LYRM1O43325 122 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 RDH16O75452 317 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 GABRA3P34903 492 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 SLC16A1P53985 500 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CEBPEQ15744 281 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 ZNF628Q5EBL2 1059 aa12.19□□□□□ -0.46
CTNS-201ENST00000046640 CD300LDQ6UXZ3 194 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms