RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ppp1r3eQ8BRJ4 279 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Slc35b4Q8CIA5 331 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Amdhd2Q8JZV7 409 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr1389Q8VGX0 311 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Pcdh18Q8VHR0 1134 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Stx11Q9D3G5 287 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Actrt1Q9D9J3 376 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Slc25a18Q9DB41 320 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cdc20Q9JJ66 499 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Tagln3Q9R1Q8 199 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nfkb2Q9WTK5 899 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ckap5A2AGT5 2032 aaKnown RBP9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zfp937A2ANU7 503 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr608E9Q564 316 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zfp760E9QAF5 666 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Apoa2P09813 102 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gnao1P18872 354 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Agbl4Q09LZ8 540 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mtmr11Q3V1L6 700 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zscan26Q5RJ54 466 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Prokr2Q8K458 381 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Plet1Q8VEN2 237 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Twist2Q9D030 160 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zdhhc21Q9D270 265 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 NfkbiaQ9Z1E3 314 aa9.18□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm20489A2AGH5 449 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Sult2a6B2RVI8 285 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm19345G3UYD9 124 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Psmb10O35955 273 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 H2-T3P14432 384 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Dpp4P28843 760 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nat3P50296 290 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Limk1P53668 647 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Adamts15P59384 950 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Six5P70178 719 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fam160a2Q3U2I3 975 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Abcb7Q61102 752 aaKnown RBP9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cadm2Q8BLQ9 435 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Rnf26Q8BUH7 424 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vmn1r30Q8R2D2 302 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 HnrnprQ8VHM5 632 aaKnown RBP9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 GlyatQ91XE0 296 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vmp1Q99KU0 406 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Exo5Q9CXP9 373 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fam45aQ9D8N2 357 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mapk11Q9WUI1 364 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zfhx4Q9JJN2 3550 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr396-ps1A0A0U1RNF5 211 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm13539A0A1B0GSM6 183 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr1303A2AVW1 312 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ms4a7E9Q9V5 267 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 ClockO08785 855 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 P01735 133 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cd14P10810 366 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cldn34b4Q3V0X2 211 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Znf488Q5HZG9 337 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Taar6Q5QD13 345 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Abcg1Q64343 666 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Lhfpl6Q8BM86 200 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Dusp28Q8BTR5 163 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vps9d1Q8C190 649 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Panx3Q8CEG0 392 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr672Q8VG28 312 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mospd2Q9CWP6 518 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Cpn1Q9JJN5 457 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nckap5E9QAE1 1909 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 CN725425A0A087WRU1 652 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm14418A2ARR6 358 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm14322A2AW66 358 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm8180E9PXN0 145 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Olfr31E9Q3K2 317 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Zfp605E9QAH2 694 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Prl8a2O54832 240 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fkbp7O54998 218 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Fth1P09528 182 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Syt4P40749 425 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Nkx2-2P42586 273 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ccdc69Q3TCJ8 202 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Spata13Q5DU57 656 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vgll4Q80V24 287 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Reep1Q8BGH4 201 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Rdh16f2Q8K3M1 318 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Snx4Q91YJ2 450 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Q9CXL3 195 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Armc8Q9DBR3 673 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Wwtr1Q9EPK5 395 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Kcnd3Q9Z0V1 655 aa9.17□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Scn2aA0A0J9YTW6 2006 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Slc25a43A2A3V2 341 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Smpd5D6MZJ6 483 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 MthfsdQ3URQ7 372 aaKnown RBP9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Mrm3Q5ND52 418 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Dlgap3Q6PFD5 977 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Morn4Q6PGF2 146 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Abhd13Q80UX8 337 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Ugt2a3Q8BWQ1 534 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 P2ry10bQ8BY68 352 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Gm9938Q8C3P5 112 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Spata33Q8C624 132 aa9.16□□□□□ -0.94
Ccdc38-201ENSMUST00000092215 Vmn1r6Q8R2D4 303 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms