RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Prss55Q14BX2 321 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Acss3Q14DH7 682 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cyb5r4Q3TDX8 528 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Entpd6Q3U0P5 455 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 MeikinQ5F2C3 434 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Galnt2Q6PB93 570 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm9758Q80ZT2 255 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sgpp2Q810K3 354 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Atg4bQ8BGE6 393 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ap5m1Q8BJ63 490 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc26a9Q8BU91 790 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 NotumQ8R116 503 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Etv3Q8R4Z4 513 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ppil3Q9D6L8 161 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 UqcrbQ9D855 111 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tmem37Q9JJV3 211 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tas2r103Q9JKA3 312 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tcrg-V3A0A0G2JEW2 117 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp282E9PVC2 666 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dcpp2E9PYC2 171 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm3327F7C9A1 213 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dcpp1L7N1X9 171 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 MgllO35678 303 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 H2-K1P01901 369 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mup3P04939 184 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hes5P70120 167 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rps5P97461 204 aaKnown RBP9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tmprss11cQ1JRP2 431 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Apcdd1Q3U128 514 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pak6Q3ULB5 682 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Obox3Q3UT54 335 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sgk494Q5SYL1 278 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 EdnraQ61614 427 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nsg1Q62092 185 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Adh7Q64437 374 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nars2Q8BGV0 477 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cep68Q8C0D9 733 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SdslQ8R238 329 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RergQ8R367 199 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mcoln1Q99J21 580 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cyp2u1Q9CX98 530 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rnf32Q9JIT1 368 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tp73Q9JJP2 631 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Il17dA0A0B4J1G4 205 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PvrigA0A1B0GS01 234 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Btbd16E9Q173 522 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Adamts3E9Q287 1204 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm8220F6YKI2 213 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dbx2F8VQH7 377 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r27K7N688 303 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1221L7MU53 311 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RbpjlO08674 515 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nthl1O35980 300 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DctP29812 517 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 FshrP35378 692 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zic1P46684 447 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ddx6P54823 483 aaKnown RBP9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Barhl1P63157 327 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nudt18Q3U2V3 323 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Spire1Q52KF3 598 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tas2r104Q7M723 302 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fbxl21Q8BFZ4 434 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r83Q8R287 306 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Elf5Q8VDK3 253 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Elovl6Q920L5 267 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SmoxQ99K82 555 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dnmt3lQ9CWR8 421 aaKnown RBP9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Aldh7a1Q9DBF1 539 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Prss16Q9QXE5 509 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Plekhb1Q9QYE9 243 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ak4Q9WUR9 223 aaKnown RBP9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Aloxe3Q9WV07 711 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pgm2A2CEK3 580 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Arl9F7BE40 171 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr741L7N1Y5 311 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tyrp1P07147 537 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ntrk2P15209 821 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cd28P31041 218 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nat3P50296 290 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cdh11P55288 796 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc1a3P56564 543 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nup43P59235 380 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fabp5Q05816 135 aaKnown RBP9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Snap91Q61548 901 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 CishQ62225 257 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sdc3Q64519 442 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mfsd4aQ6PDC8 510 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr298Q7TS06 332 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cxcl16Q8BSU2 246 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tor2aQ8R1J9 321 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ubqln1Q8R317 582 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Clec14aQ8VCP9 459 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1020Q8VFK7 317 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cmtm3Q99LJ5 184 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Steap1Q9CWR7 339 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ceacam20Q9D2Z1 577 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Prss52Q9D9M0 321 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Syt8Q9R0N6 395 aa9.13□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc23a4A0A0J9YUX7 615 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr560A0A1B0GSU5 314 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms