RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 KLRC4-KLRK1H3BQV0 150 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 K7EM74 188 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 GTPBP1O00178 669 aaKnown RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SYT5O00445 386 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 ADAM10O14672 748 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SUV39H1O43463 412 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 NME2P1O60361 137 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 TPST1O60507 370 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 EIF4E2O60573 245 aaKnown RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CIB2O75838 187 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 LGI1O95970 557 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SERPINA1P01009 418 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 OPN1SWP03999 348 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 PDGFAP04085 211 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SFTPCP11686 197 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CD247P20963 164 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 NME2P22392 152 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 MSX1P28360 303 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 EIPR1Q53HC9 387 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CYBRD1Q53TN4 286 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 PRAMEF20Q5VT98 475 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF836Q6ZNA1 936 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 Q6ZS92 163 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SPPL2CQ8IUH8 684 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SULF2Q8IWU5 870 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 AQP12AQ8IXF9 295 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CLIP4Q8N3C7 705 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 RBMXL3Q8N7X1 1067 aaKnown RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF614Q8N883 585 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 TMEM178AQ8NBL3 297 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 C9orf43Q8TAL5 461 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 PHOSPHO1Q8TCT1 267 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 DUSP19Q8WTR2 217 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SLC35B4Q969S0 331 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CCDC124Q96CT7 223 aaKnown RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 LRGUKQ96M69 825 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 FAM173AQ9BQD7 235 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 DOHHQ9BU89 302 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 RTN4RQ9BZR6 473 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 SAMD4AQ9UPU9 718 aaKnown RBP11.26□□□□□ -0.61
LINC00339-213ENST00000642137 CHST2Q9Y4C5 530 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 WIF1Q9Y5W5 379 aa11.26□□□□□ -0.61
LINC00339-213ENST00000642137 IGLV3-32A0A0A0MS00 114 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 CDHR4A6H8M9 788 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF264O43296 627 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 SCO2O43819 266 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 PEX1O43933 1283 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-213ENST00000642137 CSTAP01040 98 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 FESP07332 822 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 FAM87AP0C7U9 286 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 UMPSP11172 480 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 FLOT2Q14254 428 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 CD226Q15762 336 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 MRPL2Q5T653 305 aaKnown RBP11.25□□□□□ -0.61
LINC00339-213ENST00000642137 BICRALQ6AI39 1079 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 RPUSD3Q6P087 351 aaKnown RBP11.25□□□□□ -0.61
LINC00339-213ENST00000642137 CYP2R1Q6VVX0 501 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF771Q7L3S4 317 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-213ENST00000642137 HMGN2P46Q86SG4 172 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF440Q8IYI8 595 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 FAM71CQ8NEG0 241 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 GPR32P1Q8NGA4 272 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 WBP1Q96G27 269 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 PYURFQ96I23 114 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 TRIM15Q9C019 465 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 GALNT9Q9HCQ5 603 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 EXOSC3Q9NQT5 275 aaKnown RBP11.25□□□□□ -0.61
LINC00339-213ENST00000642137 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 KLHL28Q9NXS3 571 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 PPP4R1LQ9P1A2 415 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 SLC13A4Q9UKG4 626 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 TP53TG5Q9Y2B4 290 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 FREM2Q5SZK8 3169 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 CNTRLQ7Z7A1 2325 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 IGF2RP11717 2491 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
LINC00339-213ENST00000642137 TCRBV5S2A0A599 114 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CLDN24A6NM45 220 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 ERVH48-1M5A8F1 160 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 SNPHO15079 494 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CBR3O75828 277 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 PRKD3O94806 890 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 EPPINO95925 133 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 UBL4AP11441 157 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 ATP6V1B2P21281 511 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CD97P48960 835 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 DNASE1L1P49184 302 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 P2RX1P51575 399 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF169Q14929 603 aaPredicted RBP11.24□□□□□ -0.61
LINC00339-213ENST00000642137 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 C1orf146Q5VVC0 180 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms