RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 ATP13A2Q9NQ11 1180 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 MED17Q9NVC6 651 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 BABAM2Q9NXR7 383 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 KLHL28Q9NXS3 571 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 PRR23AA6NEV1 266 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 REM1O75628 298 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 EIF4EP06730 217 aaKnown RBP12.87□□□□□ -0.35
PHGDH-233ENST00000642021 GLULP15104 373 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 INPP1P49441 399 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF136P52737 540 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 OR10A3P58181 314 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 GNG2P59768 71 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 HEPHL1Q6MZM0 1159 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF836Q6ZNA1 936 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 RAB7BQ96AH8 199 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 C10orf90Q96M02 699 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 OR52D1Q9H346 318 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF443Q9Y2A4 671 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-233ENST00000642021 GKN3PP0CG01 181 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 MAKP20794 623 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
PHGDH-233ENST00000642021 IFNA8P32881 189 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 THBS2P35442 1172 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ADAM15Q13444 863 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 MAPK14Q16539 360 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 MFSD12Q6NUT3 480 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 GJD3Q8N144 294 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 PFN4Q8NHR9 129 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ALG8Q9BVK2 526 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 HDHD2Q9H0R4 259 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 SLC28A3Q9HAS3 691 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
PHGDH-233ENST00000642021 MDC1Q14676 2089 aaKnown RBP12.87□□□□□ -0.35
PHGDH-233ENST00000642021 ORC5O43913 435 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 OR5F1O95221 314 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 NR4A3Q92570 626 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 PTP4A1Q93096 173 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 B3GNT4Q9C0J1 378 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 NIPAL2Q9H841 368 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 CYSLTR2Q9NS75 346 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 CALML5Q9NZT1 146 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 PRKAG2Q9UGJ0 569 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 REV3LO60673 3130 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 MUC22E2RYF6 1773 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 RGS9O75916 674 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 OR2B3O76000 313 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 NFATC1O95644 943 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 HMGN1P05114 100 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 CEACAM5P06731 702 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 TEAD1P28347 426 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SLC6A1P30531 599 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 E2F1Q01094 437 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 DUSP5Q16690 384 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SLC37A3Q8NCC5 494 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 KISS1RQ969F8 398 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 UBL7Q96S82 380 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 JAM3Q9BX67 310 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 RSPH9Q9H1X1 276 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 ENAMQ9NRM1 1142 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 WDR45Q9Y484 360 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 HSPB11Q9Y547 144 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SLC19A2O60779 497 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 TRIM3O75382 744 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 HTR2AP28223 471 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 MTNR1BP49286 362 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SRP9P49458 86 aaKnown RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 ARFIP1P53367 373 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 GPR68Q15743 365 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 TMEM44Q2T9K0 475 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 KLHL12Q53G59 568 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 FCRLBQ6BAA4 426 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 ARL9Q6T311 187 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 MEPCEQ7L2J0 689 aaKnown RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 OR5M3Q8NGP4 307 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 TRIM63Q969Q1 353 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SIDT1Q9NXL6 827 aaKnown RBP12.86□□□□□ -0.35
PHGDH-233ENST00000642021 SATB2Q9UPW6 733 aa12.86□□□□□ -0.35
PHGDH-233ENST00000642021 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms