RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
PHGDH-221ENST00000641573 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 NPIPB9F8W1W9 429 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PCDH17O14917 1159 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 SNAP29O95721 258 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 IL33O95760 270 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 DLGAP3O95886 979 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 H1F0P07305 194 aaKnown RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 FUT4P22083 530 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 LIMS1P48059 325 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 RNF144AP50876 292 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 DAPP51397 102 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ATP12AP54707 1039 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 SMIM11AP58511 58 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 MERTKQ12866 999 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 FOXD4Q12950 439 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PIN1Q13526 163 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF141Q15928 474 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 MICAQ29983 383 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PDZK1Q5T2W1 519 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 TAGAPQ8N103 731 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 MARVELD2Q8N4S9 558 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 DHRSXQ8N5I4 330 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PIK3C3Q8NEB9 887 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 OR10G2Q8NGC3 310 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PHF10Q8WUB8 498 aaKnown RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 CYGBQ8WWM9 190 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 TFAP2CQ92754 450 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 DHRS1Q96LJ7 313 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 CNBD2Q96M20 576 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PRRC1Q96M27 445 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 RDH12Q96NR8 316 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ALPK1Q96QP1 1244 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 LMF1Q96S06 567 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 LPAR4Q99677 370 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 FNDC11Q9BVV2 318 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 TMEFF2Q9UIK5 374 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PADI1Q9ULC6 663 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
PHGDH-221ENST00000641573 PCDHGA3Q9Y5H0 932 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 MYO9AB2RTY4 2548 aa12.08□□□□□ -0.48
PHGDH-221ENST00000641573 FLNCQ14315 2725 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 CDHR4A6H8M9 788 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 C9orf172C9J069 976 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 AP3D1O14617 1153 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TO15178 435 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TPST2O60704 377 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 MITFO75030 526 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 SEC24DO94855 1032 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 CCNB2O95067 398 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 UMODP07911 640 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 IGFBP5P24593 272 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 CAPGP40121 348 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 NR0B1P51843 470 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 RAD23AP54725 363 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ADARB1P78563 741 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 EPS8Q12929 822 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 PDK3Q15120 406 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 RFX4Q33E94 735 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 SLC36A3Q495N2 470 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 C3orf38Q5JPI3 329 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 FGD3Q5JSP0 725 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 MRPL2Q5T653 305 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TIPARPQ7Z3E1 657 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TSPYL5Q86VY4 417 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 CHERPQ8IWX8 916 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 SLC5A8Q8N695 610 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 AMER2Q8N7J2 671 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF614Q8N883 585 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ATG16L2Q8NAA4 619 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 NR4A3Q92570 626 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 EFHD2Q96C19 240 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 C8orf44Q96CB5 159 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 MCHR1Q99705 422 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TOR3AQ9H497 397 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 EVA1AQ9H8M9 152 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ASCL3Q9NQ33 180 aa12.07□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF223Q9UK11 482 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 MRTO4Q9UKD2 239 aaKnown RBP12.07□□□□□ -0.48
PHGDH-221ENST00000641573 TMCC3Q9ULS5 477 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms