RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HINT3Q9NQE9 182 aaKnown RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 RLN1P04808 185 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 RPLP2P05387 115 aaKnown RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 PRPH2P23942 346 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 GDI2P50395 445 aaKnown RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 OR12D2P58182 307 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 CFAP206Q8IYR0 622 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 CYB5D2Q8WUJ1 264 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 SLC25A28Q96A46 364 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 TMEM129A0AVI4 362 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 B3GALNT1O75752 331 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 SULT1A3P0DMM9 295 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 SULT1A4P0DMN0 295 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 PAICSP22234 425 aaKnown RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 MMP12P39900 470 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 LMAN2Q12907 356 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 DEFB115Q30KQ5 88 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF322Q6U7Q0 402 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 APOOLQ6UXV4 268 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-227ENST00000640957 VRK2Q86Y07 508 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 NRMQ8IXM6 262 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 GPR174Q9BXC1 333 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
SCARB2-227ENST00000640957 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 KCNAB3O43448 404 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 PRICKLE3O43900 615 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 SLC19A2O60779 497 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 LRG1P02750 347 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ATF1P18846 271 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ACHEP22303 614 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF169Q14929 603 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 GRHL2Q6ISB3 625 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 HDDC3Q8N4P3 179 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF354BQ96LW1 612 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 RIOK2Q9BVS4 552 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 MLXQ9UH92 298 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 A0A087WV48 116 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 TRBV5-4A0A0C4DH59 114 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 GFYI3L273 518 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 KCNJ5P48544 419 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 CDKN3Q16667 212 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 RGS7BPQ6MZT1 257 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ADCK2Q7Z695 626 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 APOBEC4Q8WW27 367 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 PLD4Q96BZ4 506 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ZCCHC3Q9NUD5 404 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 CCL16O15467 120 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 KHDRBS3O75525 346 aaKnown RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 UBXN7O94888 489 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 EPPINO95925 133 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 NFYAP23511 347 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 SERTAD2Q14140 314 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 PDXPQ96GD0 296 aa12.84□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-227ENST00000640957 SCN3AQ9NY46 2000 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 KPNA3O00505 521 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 BET1O15155 118 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 RGS9O75916 674 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 RLN2P04090 185 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 APEHP13798 732 aaKnown RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 THBS2P35442 1172 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 B2MP61769 119 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 CDK5Q00535 292 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 OR11G2Q8NGC1 345 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 ATOH1Q92858 354 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF559Q9BR84 538 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 EXOSC1Q9Y3B2 195 aaKnown RBP12.83□□□□□ -0.36
SCARB2-227ENST00000640957 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 PSMB5P28074 263 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 DCTDP32321 178 aa12.83□□□□□ -0.36
SCARB2-227ENST00000640957 TRHRP34981 398 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms