RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 OR13C2Q8NGS9 318 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 ACTRT3Q9BYD9 372 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 ENAMQ9NRM1 1142 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 TMEM74BQ9NUR3 256 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 WSB2Q9NYS7 404 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-221ENST00000640341 LIPT1Q9Y234 373 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
SCARB2-221ENST00000640341 PROM1O43490 865 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 E2F1Q01094 437 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 ADAM15Q13444 863 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 MAPK14Q16539 360 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 TMEM35AQ53FP2 167 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 AGBL4Q5VU57 503 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 KIAA1211LQ6NV74 962 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 CEACAM19Q7Z692 300 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 BEST4Q8NFU0 473 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 CCL4L1Q8NHW4 92 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 RNF170Q96K19 258 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF443Q9Y2A4 671 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-221ENST00000640341 A0A1W2PQU0 124 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 EML2O95834 649 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 LAMP2P13473 410 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 TEAD1P28347 426 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 CMPK1P30085 196 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 PYCR1P32322 319 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-221ENST00000640341 TMEM31Q5JXX7 168 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 FAM205BPQ63HN1 556 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-221ENST00000640341 OR4M1Q8NGD0 313 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 TMEM43Q9BTV4 400 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 PRKAG2Q9UGJ0 569 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
SCARB2-221ENST00000640341 MDC1Q14676 2089 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 H0Y8X5 98 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 MEN1O00255 615 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 RNF13O43567 381 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 EIF4EP06730 217 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 CD3GP09693 182 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 NT5EP21589 574 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 PEBP1P30086 187 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 FGF9P31371 208 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 EXOSC7Q15024 291 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 TANGO2Q6ICL3 276 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 ZNF836Q6ZNA1 936 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 FRRS1Q6ZNA5 592 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 IZUMO1Q8IYV9 350 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 POGLUT1Q8NBL1 392 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 FGF11Q92914 225 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 CD180Q99467 661 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 UCKL1Q9NWZ5 548 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 IL20Q9NYY1 176 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 MRPL15Q9P015 296 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 LOC105369274A0A096LPK9 316 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 SCO2O43819 266 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 HCN1O60741 890 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 EFCAB14O75071 495 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 MAKP20794 623 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 FPR3P25089 353 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 MLC1Q15049 377 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 OR4N4Q8N0Y3 316 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-221ENST00000640341 ORAI1Q96D31 301 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 NLGN3Q9NZ94 848 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 CDH10Q9Y6N8 788 aa13.59□□□□□ -0.23
SCARB2-221ENST00000640341 H3BSH0 61 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 PSMD9O00233 223 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 HTR1FP30939 366 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 STAT5AP42229 794 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 OR12D2P58182 307 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 EOGTQ5NDL2 527 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 VASNQ6EMK4 673 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 WDR88Q6ZMY6 472 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 MBOAT2Q6ZWT7 520 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 NRROSQ86YC3 692 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 LRRC25Q8N386 305 aaPredicted RBP13.58□□□□□ -0.23
SCARB2-221ENST00000640341 ARL14Q8N4G2 192 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 ARIH2OSQ8N7S6 290 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 IL17RCQ8NAC3 791 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 OR8H1Q8NGG4 311 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 C4orf36Q96KX1 117 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 THAP7Q9BT49 309 aaPredicted RBP13.58□□□□□ -0.23
SCARB2-221ENST00000640341 MED18Q9BUE0 208 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 FGF22Q9HCT0 170 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.23
SCARB2-221ENST00000640341 ZGLP1P0C6A0 271 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 PKLRP30613 574 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 AGFG1P52594 562 aaKnown RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 TRA2BP62995 288 aaKnown RBP13.58□□□□□ -0.24
SCARB2-221ENST00000640341 ABATP80404 500 aa13.58□□□□□ -0.24
SCARB2-221ENST00000640341 SRSF5Q13243 272 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms