RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 OR52D1Q9H346 318 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 FOLH1BQ9HBA9 442 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 ATP13A2Q9NQ11 1180 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 POLE3Q9NRF9 147 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 ABCB10Q9NRK6 738 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 SSR3Q9UNL2 185 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 UNC119BA6NIH7 251 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 HRKO00198 91 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 FMO6PO60774 539 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 UPK1BO75841 260 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 ZGLP1P0C6A0 271 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 MAKP20794 623 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 TGM1P22735 817 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 SSTR4P31391 388 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 EMDP50402 254 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 PDZK1Q5T2W1 519 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 PARP16Q8N5Y8 322 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 TM9SF4Q92544 642 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 UBQLN3Q9H347 655 aa19.93■□□□□ 0.78
CLN6-224ENST00000638076 SIDT1Q9NXL6 827 aaKnown RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 EXOSC1Q9Y3B2 195 aaKnown RBP19.93■□□□□ 0.78
CLN6-224ENST00000638076 PNMA8CA0A1B0GUJ8 204 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 A0A1W2PR77 199 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 ZNF670-ZNF695F2Z2N8 137 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 IFI30P13284 250 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 SKP1P63208 163 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 ZNF45Q02386 682 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 ZNHIT3Q15649 155 aaPredicted RBP19.92■□□□□ 0.78
CLN6-224ENST00000638076 PLEKHG7Q6ZR37 379 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 MINDY2Q8NBR6 621 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 BBS1Q8NFJ9 593 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 FANK1Q8TC84 345 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 NELL2Q99435 816 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 CD180Q99467 661 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 LMF2Q9BU23 707 aaKnown RBP19.92■□□□□ 0.78
CLN6-224ENST00000638076 POLE4Q9NR33 117 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 KLHL3Q9UH77 587 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 OR2W5A6NFC9 320 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 METTL12A8MUP2 240 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 HMGN1P05114 100 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 TSPAN19P0C672 248 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 LIMS3P0CW19 117 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 LIMS4P0CW20 117 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 FXYD6P3P58550 94 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 LRIT3Q3SXY7 679 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 LAPTM4BQ86VI4 370 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 OR4F15Q8NGB8 312 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 BRIX1Q8TDN6 353 aaKnown RBP19.92■□□□□ 0.78
CLN6-224ENST00000638076 CNOT9Q92600 299 aaKnown RBP19.92■□□□□ 0.78
CLN6-224ENST00000638076 TMEM203Q969S6 136 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 IRAK4Q9NWZ3 460 aa19.92■□□□□ 0.78
CLN6-224ENST00000638076 MRPS33Q9Y291 106 aaKnown RBP19.92■□□□□ 0.78
CLN6-224ENST00000638076 CCDC85CA6NKD9 419 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 TBX1O43435 398 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 CTNSO60931 367 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 DRD5P21918 477 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 BTG2P78543 158 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 BNC1Q01954 994 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 TMEM44Q2T9K0 475 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 NXNL2Q5VZ03 156 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 LHFPL3Q86UP9 236 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 UBE2ZQ9H832 354 aaPredicted RBP19.91■□□□□ 0.78
CLN6-224ENST00000638076 PRTFDC1Q9NRG1 225 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 DTX4Q9Y2E6 619 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 SAGE2PA6NJ88 616 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 CTDSP2O14595 271 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 HRO43593 1189 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 IGKV1D-16P01601 117 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 CD79BP40259 229 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 UBXN2BQ14CS0 331 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 LYSMD2Q8IV50 215 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 ZNF595Q8IYB9 648 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 GRHL3Q8TE85 626 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 HS6ST2Q96MM7 605 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 PHOX2BQ99453 314 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 TMEM27Q9HBJ8 222 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 HINT3Q9NQE9 182 aaKnown RBP19.91■□□□□ 0.78
CLN6-224ENST00000638076 H2AFY2Q9P0M6 372 aaPredicted RBP19.91■□□□□ 0.78
CLN6-224ENST00000638076 CBLCQ9ULV8 474 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 TMEM131Q92545 1883 aa19.91■□□□□ 0.78
CLN6-224ENST00000638076 SOX30O94993 753 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 NSA2O95478 260 aaKnown RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 SLC1A3P43003 542 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 GFERP55789 205 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 FZD5Q13467 585 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 FAM53BQ14153 422 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 AMZ1Q400G9 498 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 SLC22A16Q86VW1 577 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 CPOQ8IVL8 374 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 METTL27Q8N6F8 245 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 OR52L1Q8NGH7 329 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 OTULINQ96BN8 352 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 TGM7Q96PF1 710 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 ZNF559Q9BR84 538 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 BARHL1Q9BZE3 327 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 ENKD1Q9H0I2 346 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 MIR1-1HGQ9H1L0 117 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 RERGLQ9H628 205 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 UCK1Q9HA47 277 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms