RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RFC2P35250 354 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 BMXP51813 675 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 GSCP56915 257 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 TMEM236Q5W0B7 351 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 TOMM40LQ969M1 308 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 MAP3K3Q99759 626 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 OR6C2Q9NZP2 312 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 FBLP22087 321 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 PREPP48147 710 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 KCNAB2Q13303 367 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 SLC16A5O15375 505 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 MCOLN1Q9GZU1 580 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 PSAT1Q9Y617 370 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 TMEM150BA6NC51 233 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 IGFBP1P08833 259 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 SCGB1C2P0DMR2 95 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 MR1Q95460 341 aa18.35■□□□□ 0.53
CACNA1A-257ENST00000638009 DUSP11O75319 330 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 RHEBL1Q8TAI7 183 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 GPR152Q8TDT2 470 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 MUS81Q96NY9 551 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 RPS21P63220 83 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 FKBP1BP68106 108 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 IRF9Q00978 393 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OR5W2Q8NH69 310 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 HES2Q9Y543 173 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 C2CD4BA6NLJ0 364 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 MMP3P08254 477 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OR5H8P0DN80 308 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 NFATC2Q13469 925 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 PRRC1Q96M27 445 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 THAP7Q9BT49 309 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 TLR9Q9NR96 1032 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 RNF150Q9ULK6 438 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 ANKRD36A6QL64 1941 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 KDELR3O43731 214 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 DEFA4P12838 97 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 SELPP16109 830 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 MVB12BQ9H7P6 319 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 MAKP20794 623 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 AKR1C1Q04828 323 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 FAM182AQ5T1J6 154 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 FAM69BQ5VUD6 431 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 SLX4IPQ5VYV7 408 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 ASB17Q8WXJ9 295 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 ST6GALNAC5Q9BVH7 336 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 PCED1AQ9H1Q7 454 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 GAREM1Q9H706 876 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 CACNA1EQ15878 2313 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 ABCA4P78363 2273 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 ACPPP15309 386 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OR52E2Q8NGJ4 325 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OR8U1Q8NH10 309 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 PSMF1Q92530 271 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 DHRS9Q9BPW9 319 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OARD1Q9Y530 152 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 TRAV18A0A075B6X5 111 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 OR12D1P0DN82 309 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 GIPRP48546 466 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 RAB13P51153 203 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
CACNA1A-257ENST00000638009 JUPP14923 745 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 CTRB1P17538 263 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 SLC14A1Q13336 389 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 SIRPB2Q5JXA9 342 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 TMEM201Q5SNT2 666 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 CARD17Q5XLA6 110 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 CTRB2Q6GPI1 263 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 SERPINA11Q86U17 422 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 B3GNT5Q9BYG0 378 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 C1orf226A1L170 272 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 MINDY1Q8N5J2 469 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 OR4F6Q8NGB9 312 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 GTF2H4Q92759 462 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 ALG12Q9BV10 488 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 PCDHAC2Q9Y5I4 1007 aa18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 PHF3Q92576 2039 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-257ENST00000638009 MT-ND4P03905 459 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 SNRPD2P62316 118 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 BRIX1Q8TDN6 353 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 ZDHHC2Q9UIJ5 367 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 CRYM-AS1A6NIL9 109 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 DRD5P21918 477 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 CYP27C1Q4G0S4 372 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 SLC46A3Q7Z3Q1 461 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 SIMC1Q8NDZ2 872 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 SMIM12Q96EX1 92 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 SLCO5A1Q9H2Y9 848 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 FBRSQ9HAH7 460 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 PREX1Q8TCU6 1659 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 ASGR2P07307 311 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 ANXA7P20073 488 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 LILRA4P59901 499 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 ARSIQ5FYB1 569 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 OGFOD3Q6PK18 319 aa18.33■□□□□ 0.52
CACNA1A-257ENST00000638009 AGTRAPQ6RW13 159 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms