RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CLEC9AQ6UXN8 241 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 Q71RC1 249 aaPredicted RBP16.54■□□□□ 0.24
CLN6-220ENST00000637450 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 HOMEZQ8IX15 550 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 GATSQ8NAP1 163 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 LRRN4CLQ8ND94 238 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 CCL19Q99731 98 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 ZNF395Q9H8N7 513 aaPredicted RBP16.54■□□□□ 0.24
CLN6-220ENST00000637450 UBQLN4Q9NRR5 601 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 MCTS1Q9ULC4 181 aaKnown RBP16.54■□□□□ 0.24
CLN6-220ENST00000637450 CLEC4AQ9UMR7 237 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 NSD1Q96L73 2696 aaPredicted RBP16.53■□□□□ 0.24
CLN6-220ENST00000637450 A0A1W2PQD3 144 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 CXCL13O43927 109 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 PLGP00747 810 aaPredicted RBP16.53■□□□□ 0.24
CLN6-220ENST00000637450 THBDP07204 575 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 HPGDP15428 266 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 PPP3CBP16298 524 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 ASMTP46597 345 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 SERPINB4P48594 390 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 ZNF41P51814 821 aaPredicted RBP16.53■□□□□ 0.24
CLN6-220ENST00000637450 CTBP2P56545 445 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 MLC1Q15049 377 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 GALNTL6Q49A17 601 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 STAC2Q6ZMT1 411 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 C20orf204Q6ZNR8 217 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 R3HCC1LQ7Z5L2 792 aaKnown RBP16.53■□□□□ 0.24
CLN6-220ENST00000637450 MISPQ8IVT2 679 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 OR2V1Q8NHB1 315 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 POC1BQ8TC44 478 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 FAM120BQ96EK7 910 aaKnown RBP16.53■□□□□ 0.24
CLN6-220ENST00000637450 RNF145Q96MT1 663 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 KLHDC3Q9BQ90 382 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 GLRX2Q9NS18 164 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 ATP6V1HQ9UI12 483 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 TRAF6Q9Y4K3 522 aa16.53■□□□□ 0.24
CLN6-220ENST00000637450 A0A0J9YW62 118 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 SCDO00767 359 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 KLF4O43474 513 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 SYNGR4O95473 234 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 HSPA4LO95757 839 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 EFNA1P20827 205 aaPredicted RBP16.52■□□□□ 0.24
CLN6-220ENST00000637450 PRIM2P49643 509 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 CD226Q15762 336 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 CCNJQ5T5M9 372 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 LRIG3Q6UXM1 1119 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 ESPNLQ6ZVH7 1005 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 COX18Q8N8Q8 333 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 B4GALNT2Q8NHY0 566 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 PPP1R14CQ8TAE6 165 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 OTUB1Q96FW1 271 aaPredicted RBP16.52■□□□□ 0.24
CLN6-220ENST00000637450 SH3YL1Q96HL8 342 aaPredicted RBP16.52■□□□□ 0.24
CLN6-220ENST00000637450 BTBD2Q9BX70 525 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 DUSP22Q9NRW4 184 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.24
CLN6-220ENST00000637450 GIN1Q9NXP7 522 aa16.52■□□□□ 0.24
CLN6-220ENST00000637450 ROS1P08922 2347 aa16.52■□□□□ 0.23
CLN6-220ENST00000637450 FAM171A2A8MVW0 826 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 TMEM233B4DJY2 109 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 TNFSF11O14788 317 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 NPHS1O60500 1241 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 HMGN2P05204 90 aaKnown RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 HEXAP06865 529 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 CHRNGP07510 517 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 LINGO3P0C6S8 592 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 DDX5P17844 614 aaKnown RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 POU6F2P78424 691 aaPredicted RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 ARL13AQ5H913 290 aaPredicted RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 BEX5Q5H9J7 111 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 PDSS1Q5T2R2 415 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 HBMQ6B0K9 141 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 TRABD2AQ86V40 505 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 DDIASQ8IXT1 998 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 CIARTQ8N365 385 aaPredicted RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 TWIST2Q8WVJ9 160 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 OSTF1Q92882 214 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 ARSGQ96EG1 525 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 COX4I2Q96KJ9 171 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 STACQ99469 402 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 PIGUQ9H490 435 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 TMEM185BQ9H7F4 350 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 ZCCHC3Q9NUD5 404 aaKnown RBP16.51■□□□□ 0.23
CLN6-220ENST00000637450 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
CLN6-220ENST00000637450 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 PIP5K1BO14986 540 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
CLN6-220ENST00000637450 ME2P23368 584 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 EIF1P41567 113 aaKnown RBP16.5■□□□□ 0.23
CLN6-220ENST00000637450 CARD18P57730 90 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 LASP1Q14847 261 aaKnown RBP16.5■□□□□ 0.23
CLN6-220ENST00000637450 GTF2IRD2BQ6EKJ0 949 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 BEND4Q6ZU67 534 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 YTHDF3Q7Z739 585 aaKnown RBP16.5■□□□□ 0.23
CLN6-220ENST00000637450 GTF2IRD2Q86UP8 949 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 LILRA2Q8N149 483 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 BANPQ8N9N5 519 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 OR7A2PQ8NGA2 310 aa16.5■□□□□ 0.23
CLN6-220ENST00000637450 JADE3Q92613 823 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms