RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HMGN2P05204 90 aaKnown RBP16.13■□□□□ 0.17
PNKP-225ENST00000636214 BPGMP07738 259 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 LAMP1P11279 417 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 PRPS1L1P21108 318 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 CCT3P49368 545 aaKnown RBP16.13■□□□□ 0.17
PNKP-225ENST00000636214 CTBP2P56545 445 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 PTGR1Q14914 329 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 C6orf136Q5SQH8 315 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 CCNJQ5T5M9 372 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 BHLHB9Q6PI77 547 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 TGIF2LYQ8IUE0 185 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 GTPBP8Q8N3Z3 284 aaPredicted RBP16.13■□□□□ 0.17
PNKP-225ENST00000636214 OR4C3Q8NH37 302 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 B4GALNT2Q8NHY0 566 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 CDS1Q92903 461 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 CAVIN3Q969G5 261 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 C16orf58Q96GQ5 468 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 ACTRT3Q9BYD9 372 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 OPN3Q9H1Y3 402 aaPredicted RBP16.13■□□□□ 0.17
PNKP-225ENST00000636214 ELOVL5Q9NYP7 299 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 TESMINQ9Y4I5 508 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 A0A1W2PQD3 144 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 RGS16O15492 202 aaPredicted RBP16.12■□□□□ 0.17
PNKP-225ENST00000636214 NUDT14O95848 222 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 HRGP04196 525 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 SOAT1P35610 550 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 KIR2DL2P43627 348 aaPredicted RBP16.12■□□□□ 0.17
PNKP-225ENST00000636214 FAM27E3Q08E93 113 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 CDC73Q6P1J9 531 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 WDR93Q6P2C0 686 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 BTLAQ7Z6A9 289 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 FAM110BQ8TC76 370 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 PHOSPHO1Q8TCT1 267 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 SFXN5Q8TD22 340 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 ACTRT2Q8TDY3 377 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 MBD6Q96DN6 1003 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 HOXD1Q9GZZ0 328 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 PIGUQ9H490 435 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 RNF122Q9H9V4 155 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 SIRT3Q9NTG7 399 aaPredicted RBP16.12■□□□□ 0.17
PNKP-225ENST00000636214 MED17Q9NVC6 651 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 GIN1Q9NXP7 522 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 ZDHHC2Q9UIJ5 367 aa16.12■□□□□ 0.17
PNKP-225ENST00000636214 ACANP16112 2415 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 C16orf97H3BN30 126 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 GTPBP1O00178 669 aaKnown RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 C6orf47O95873 294 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 CD8BP10966 210 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 EIF1P41567 113 aaKnown RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 PCYT1AP49585 367 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 RAC1P63000 192 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 DCST2Q5T1A1 773 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 ESPNLQ6ZVH7 1005 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 MTERF4Q7Z6M4 381 aaKnown RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 ZAR1Q86SH2 424 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 ZNF614Q8N883 585 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 OR10D3Q8NH80 312 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 REXO5Q96IC2 774 aaKnown RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 C3orf30Q96M34 536 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 RNF145Q96MT1 663 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 DUSP26Q9BV47 211 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 BHLHE41Q9C0J9 482 aaPredicted RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 KLHL28Q9NXS3 571 aa16.11■□□□□ 0.17
PNKP-225ENST00000636214 NOP53Q9NZM5 478 aaKnown RBP16.11■□□□□ 0.17
PNKP-225ENST00000636214 C7orf72A4D263 438 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 ATE1O95260 518 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 SERPINE1P05121 402 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 KLK2P20151 261 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 PDCD2Q16342 344 aaPredicted RBP16.1■□□□□ 0.17
PNKP-225ENST00000636214 EXOC3L2Q2M3D2 409 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 DEFB113Q30KQ7 82 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 PGS1Q32NB8 556 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 PLPPR5Q32ZL2 321 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 HBMQ6B0K9 141 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 GTF2IRD2BQ6EKJ0 949 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 ZNF474Q6S9Z5 364 aaPredicted RBP16.1■□□□□ 0.17
PNKP-225ENST00000636214 FAM214BQ7L5A3 538 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 GTF2IRD2Q86UP8 949 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 KIRREL3Q8IZU9 778 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 KRTCAP2Q8N6L1 136 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 OR6K3Q8NGY3 331 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 GMPPAQ96IJ6 420 aaPredicted RBP16.1■□□□□ 0.17
PNKP-225ENST00000636214 ZIM3Q96PE6 472 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 TMEM109Q9BVC6 243 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 CENPHQ9H3R5 247 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 TMEM185BQ9H7F4 350 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 PLEKHF2Q9H8W4 249 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 TIGARQ9NQ88 270 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 FBXO34Q9NWN3 711 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.1■□□□□ 0.17
PNKP-225ENST00000636214 PCDHGB4Q9UN71 923 aa16.1■□□□□ 0.17
PNKP-225ENST00000636214 V9GYY5 206 aaPredicted RBP16.1■□□□□ 0.17
PNKP-225ENST00000636214 ARID1AO14497 2285 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 WDR91A4D1P6 747 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 GJE1A6NN92 205 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 TNFSF11O14788 317 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 TYROBPO43914 113 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 AQP8O94778 261 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 MYZAPP0CAP1 466 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms