RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 BEST3Q8N1M1 668 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 SLC15A4Q8N697 577 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 FDCSPQ8NFU4 85 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 OR5M3Q8NGP4 307 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 TRNT1Q96Q11 434 aaKnown RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ADOQ96SZ5 270 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 SDF2Q99470 211 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 G6PC3Q9BUM1 346 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 GORASP2Q9H8Y8 452 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 MED13Q9UHV7 2174 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 H3BSA7 217 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 FCMRO60667 390 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 STX11O75558 287 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 PPM1BO75688 479 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 IL33O95760 270 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 DCKP27707 260 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 AQP1P29972 269 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CRISP3P54108 245 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CHRNEQ04844 493 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 GPR68Q15743 365 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 MAPK11Q15759 364 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CYBRD1Q53TN4 286 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 REEP3Q6NUK4 255 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 OPN5Q6U736 354 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 IL20RBQ6UXL0 311 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 GPR141Q7Z602 305 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ZAR1Q86SH2 424 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 SPPL2CQ8IUH8 684 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 DHRSXQ8N5I4 330 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 FAM110BQ8TC76 370 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 DIO2Q92813 273 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 COL21A1Q96P44 957 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF552Q9H707 407 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ANKRD10Q9NXR5 420 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 CALML5Q9NZT1 146 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 EGFL7Q9UHF1 273 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 MKLN1Q9UL63 735 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 ANGPT4Q9Y264 503 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
LINC00339-208ENST00000634934 HS6ST1O60243 411 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 F10P00742 488 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 FBXO45P0C2W1 286 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 PCGF2P35227 344 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 HLCSP50747 726 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 FBXW4P57775 412 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 OC90Q02509 493 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 TBR1Q16650 682 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF468Q5VIY5 522 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 TTC33Q6PID6 262 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 FIG4Q92562 907 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 EXTL1Q92935 676 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 SPACA9Q96E40 222 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 HPF1Q9NWY4 346 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 PLA2G3Q9NZ20 509 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 USE1Q9NZ43 259 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 OAZ3Q9UMX2 235 aa13.28□□□□□ -0.28
LINC00339-208ENST00000634934 BOD1L1Q8NFC6 3051 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 TSPAN2O60636 221 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 UGT2B11O75310 529 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 GMNNO75496 209 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 CEACAM4O75871 244 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 ZIC2O95409 532 aaPredicted RBP13.27□□□□□ -0.29
LINC00339-208ENST00000634934 NPIPA8P0DM63 369 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 RAP2AP10114 183 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 CYP4B1P13584 511 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 NCK1P16333 377 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 NAGAP17050 411 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 CASRP41180 1078 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 PNLIPRP2P54317 469 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 EFR3AQ14156 821 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 TYW3Q6IPR3 259 aaKnown RBP13.27□□□□□ -0.29
LINC00339-208ENST00000634934 FRRS1Q6ZNA5 592 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 SLC30A8Q8IWU4 369 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 UTP23Q9BRU9 249 aaKnown RBP13.27□□□□□ -0.29
LINC00339-208ENST00000634934 SLC38A1Q9H2H9 487 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 POLE3Q9NRF9 147 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 TBCCD1Q9NVR7 557 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 AURKCQ9UQB9 309 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 DOCK10Q96BY6 2186 aa13.27□□□□□ -0.29
LINC00339-208ENST00000634934 BSNQ9UPA5 3926 aa13.26□□□□□ -0.29
LINC00339-208ENST00000634934 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms