RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 LARS2Q15031 903 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 CD226Q15762 336 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 FXNQ16595 210 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 LIN52Q52LA3 116 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 KLHL26Q53HC5 615 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 AP1ARQ63HQ0 302 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SLC25A25Q6KCM7 469 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SLC30A6Q6NXT4 461 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 PGM2L1Q6PCE3 622 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 APOOLQ6UXV4 268 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 CYP2R1Q6VVX0 501 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF836Q6ZNA1 936 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 CCDC80Q76M96 950 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 PTRH1Q86Y79 214 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SPPL2CQ8IUH8 684 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SMYD1Q8NB12 490 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 TMEM178AQ8NBL3 297 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 PHOSPHO1Q8TCT1 267 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 RNF138Q8WVD3 245 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 TAMM41Q96BW9 452 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ASB9Q96DX5 294 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 JSRP1Q96MG2 331 aaPredicted RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 DOHHQ9BU89 302 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ANGPTL4Q9BY76 406 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 RTN4RQ9BZR6 473 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ADNPQ9H2P0 1102 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 MUC13Q9H3R2 512 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SLC7A8Q9UHI5 535 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 TUBD1Q9UJT1 453 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF232Q9UNY5 417 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF443Q9Y2A4 671 aaPredicted RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 IFT52Q9Y366 437 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 WIF1Q9Y5W5 379 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SNX13Q9Y5W8 968 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 MAP1BP46821 2468 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NCKAP5O14513 1909 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 USP24Q9UPU5 2620 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TRAV17A0A0B4J275 112 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 A0A1W2PQD3 144 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 SERINC4A6NH21 518 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ALG1L2C9J202 215 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 KLRC4-KLRK1H3BQV0 150 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 GTPBP1O00178 669 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 PEX1O43933 1283 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 GMFGO60234 142 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TPST1O60507 370 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 CIB2O75838 187 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 CYP7B1O75881 506 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 MFN2O95140 757 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 CSTAP01040 98 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 IFNA14P01570 189 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 THBS1P07996 1170 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 UBTFL6P0CB48 400 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 UBL4AP11441 157 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 NID1P14543 1247 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ATP6V1B2P21281 511 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 CNR1P21554 472 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 PRKAR1BP31321 381 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 MASP1P48740 699 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 DNASE1L1P49184 302 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 GAS1P54826 345 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 KCNJ10P78508 379 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 MS4A2Q01362 244 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TRAP1Q12931 704 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF169Q14929 603 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 NDUFAF6Q330K2 333 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 CYBRD1Q53TN4 286 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 MRPL2Q5T653 305 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 OR5M10Q6IEU7 315 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TMEM81Q6P7N7 255 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 EIF3MQ7L2H7 374 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 GALNTL5Q7Z4T8 443 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 DHFR2Q86XF0 187 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 SULF2Q8IWU5 870 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TMCO5AQ8N6Q1 288 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 RBMXL3Q8N7X1 1067 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 EXD3Q8N9H8 876 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 OR10Q1Q8NGQ4 319 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 RASSF5Q8WWW0 418 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 OIT3Q8WWZ8 545 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 SCMH1Q96GD3 660 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 SH3YL1Q96HL8 342 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 TPD52L3Q96J77 140 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 LRGUKQ96M69 825 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 NSMCE2Q96MF7 247 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 RAB3IPQ96QF0 476 aaPredicted RBP7.78□□□□□ -1.16
SGMS1-211ENST00000626236 FAM173AQ9BQD7 235 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 PINK1Q9BXM7 581 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ARMC7Q9H6L4 198 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 GORASP2Q9H8Y8 452 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 PROK2Q9HC23 129 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 SDHAF3Q9NRP4 125 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 DEPPQ9NTK1 212 aa7.78□□□□□ -1.16
SGMS1-211ENST00000626236 ADPRHL2Q9NX46 363 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms