RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SRYQ05066 204 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 GSTA3Q16772 222 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 SPANXN4Q5MJ08 99 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 CCNJQ5T5M9 372 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 POMZP3Q6PJE2 187 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 ZAR1Q86SH2 424 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 TRIML2Q8N7C3 387 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 GOLGA6L1Q8N7Z2 621 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 OR5AK3PQ8NH89 298 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 C7orf26Q96N11 449 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 CCDC115Q96NT0 180 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 ZBTB18Q99592 522 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 SH3GL2Q99962 352 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 SFXN3Q9BWM7 321 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 NMUR2Q9GZQ4 415 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 EXD2Q9NVH0 621 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 MARCOQ9UEW3 520 aaPredicted RBP20.2■□□□□ 0.82
SF1-220ENST00000626028 MPDZO75970 2070 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 C17orf51A8MQB3 221 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 HMGB1P1B2RPK0 211 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 NPIPB9F8W1W9 429 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 TNFRSF21O75509 655 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 TMIGD3P0DMS9 266 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 ZNF41P51814 821 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 DGKQP52824 942 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 SUMO3P55854 103 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 FLYWCH1Q4VC44 716 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 OR2A2Q6IF42 318 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 GALNT10Q86SR1 603 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 GTPBP8Q8N3Z3 284 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 RELL2Q8NC24 303 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 OTUB1Q96FW1 271 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 SLC35G5Q96KT7 338 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 SDF2Q99470 211 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 WDR55Q9H6Y2 383 aaPredicted RBP20.19■□□□□ 0.82
SF1-220ENST00000626028 POLE3Q9NRF9 147 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 ZNF337Q9Y3M9 751 aa20.19■□□□□ 0.82
SF1-220ENST00000626028 STX11O75558 287 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 TGDSO95455 350 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 IL6P05231 212 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 PGRP06401 933 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 KITP10721 976 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 CAPN3P20807 821 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 EIF1P41567 113 aaKnown RBP20.18■□□□□ 0.82
SF1-220ENST00000626028 MAGEA8P43361 318 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 UFM1P61960 85 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 ARHGAP11BQ3KRB8 267 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 PDCD4Q53EL6 469 aaKnown RBP20.18■□□□□ 0.82
SF1-220ENST00000626028 GRAMD2AQ8IUY3 354 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 C9orf106Q8NAJ2 232 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 B4GALNT2Q8NHY0 566 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 RNASE6Q93091 150 aaKnown RBP20.18■□□□□ 0.82
SF1-220ENST00000626028 NEURL3Q96EH8 262 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 PAQR5Q9NXK6 330 aaPredicted RBP20.18■□□□□ 0.82
SF1-220ENST00000626028 ZNF175Q9Y473 711 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 DTNAQ9Y4J8 743 aa20.18■□□□□ 0.82
SF1-220ENST00000626028 ANKRD17O75179 2603 aaKnown RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 KDM4EB2RXH2 506 aaPredicted RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 ZNF195O14628 629 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 H2AFXP16104 143 aaPredicted RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 ANXA11P50995 505 aaKnown RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 RPS3AP61247 264 aaKnown RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 PLPPR5Q32ZL2 321 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 ATAD3BQ5T9A4 648 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 SAXO2Q658L1 398 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 HEPHL1Q6MZM0 1159 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 ARSKQ6UWY0 536 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 ANKRD46Q86W74 232 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 TEX37Q96LM6 180 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 OR52E6Q96RD3 313 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 PIGMQ9H3S5 423 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 MCCC2Q9HCC0 563 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 SDR39U1Q9NRG7 319 aaPredicted RBP20.17■□□□□ 0.82
SF1-220ENST00000626028 JKAMPQ9P055 326 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 KCNE3Q9Y6H6 103 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 MYO9AB2RTY4 2548 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 PDZD2O15018 2839 aa20.17■□□□□ 0.82
SF1-220ENST00000626028 GOLGA8QA0A0J9YX86 632 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 GOLGA8OA6NCC3 632 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 GOLGA8NF8WBI6 632 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 SLC22A3O75751 556 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 ADH6P28332 368 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 CD226Q15762 336 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 ZNF141Q15928 474 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 NXNQ6DKJ4 435 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 MSANTD1Q6ZTZ1 278 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 KIF18BQ86Y91 864 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 METTL25Q8N6Q8 603 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 TOR1AIP2Q8NFQ8 470 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 OR5D16Q8NGK9 328 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 LRRC8CQ8TDW0 803 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 PANX1Q96RD7 426 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 ZNF350Q9GZX5 532 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 SERHL2Q9H4I8 314 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 ZIM2Q9NZV7 527 aa20.16■□□□□ 0.82
SF1-220ENST00000626028 SLC22A20A6NK97 555 aa20.15■□□□□ 0.82
SF1-220ENST00000626028 H3BML4 177 aa20.15■□□□□ 0.82
SF1-220ENST00000626028 EIF4E2O60573 245 aaKnown RBP20.15■□□□□ 0.82
SF1-220ENST00000626028 CPSF4O95639 269 aaKnown RBP20.15■□□□□ 0.82
SF1-220ENST00000626028 FCGR2AP12318 317 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms