RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CT45A9P0DMV2 189 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 ITGA2P17301 1181 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 HTR2AP28223 471 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 IL12BP29460 328 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 HSPA13P48723 471 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 EMP2P54851 167 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 ST3GAL4Q11206 333 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 MYBPC3Q14896 1274 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 OR1Q1Q15612 314 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CT45A2Q5DJT8 189 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CEP76Q8TAP6 659 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TANKQ92844 425 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 LRR1Q96L50 414 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 SERTM1A2A2V5 107 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 DUXAA6NLW8 204 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 NDUFB5O43674 189 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 NSA2O95478 260 aaKnown RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 GPANK1O95872 356 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 SPINK2P20155 84 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 SERPINB1P30740 379 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 STT3AP46977 705 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PCDH1Q08174 1060 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 RBBP4Q09028 425 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 C10orf62Q5T681 223 aaPredicted RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 OR2G6Q5TZ20 316 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 B3GNTL1Q67FW5 361 aaPredicted RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 KDM4DQ6B0I6 523 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TMEM71Q6P5X7 295 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PAPD4Q6PIY7 484 aaKnown RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 GDF7Q7Z4P5 450 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 OR2L13Q8N349 312 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 BCORP1Q8N888 145 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CDRT4Q8N9R6 151 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 OR4K13Q8NH42 304 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 IFT27Q9BW83 186 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 UCK2Q9BZX2 261 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 SLC39A1Q9NY26 324 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TAS2R7Q9NYW3 318 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CBLCQ9ULV8 474 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 GPC6Q9Y625 555 aaPredicted RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 SPENQ96T58 3664 aaKnown RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 H0YIG0 161 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PRKYO43930 277 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PDE9AO76083 593 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 LGI1O95970 557 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 SLC35E2P0CK97 266 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TCN2P20062 427 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TGM4P49221 684 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 MRPL19P49406 292 aaKnown RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 PLCXD2Q0VAA5 305 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 INSL4Q14641 139 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 MSANTD1Q6ZTZ1 278 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 METTL2AQ96IZ6 378 aaKnown RBP9.72□□□□□ -0.85
VPS11-208ENST00000621676 TNFRSF13CQ96RJ3 184 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CHCHD6Q9BRQ6 235 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TBL1XR1Q9BZK7 514 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 MED11Q9P086 117 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 PDP2Q9P2J9 529 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 MAPRE3Q9UPY8 281 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 TRBV11-1A0A0K0K1C0 115 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 A6NHS1 94 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 LDOC1O95751 146 aaPredicted RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 MYF6P23409 242 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 SOX3P41225 446 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 COPZ1P61923 177 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 TXNL4AP83876 142 aaKnown RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 MGAT2Q10469 447 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 PGBD2Q6P3X8 592 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 SVOPLQ8N434 492 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 DEFB124Q8NES8 71 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 OR4F15Q8NGB8 312 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 WDR36Q8NI36 951 aaKnown RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 OR5M11Q96RB7 305 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 NKX3-1Q99801 234 aaPredicted RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 APOL4Q9BPW4 351 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 PIGUQ9H490 435 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 MTHFD2LQ9H903 347 aaPredicted RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 TBC1D23Q9NUY8 699 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 SUSD2Q9UGT4 822 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 ING1Q9UK53 422 aaPredicted RBP9.71□□□□□ -0.85
VPS11-208ENST00000621676 CACNA1AO00555 2505 aa9.71□□□□□ -0.85
VPS11-208ENST00000621676 LY6G6EA0A0G2JKS1 128 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 A0A1B0GX78 115 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 RAD1O60671 282 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 CNOT3O75175 753 aaKnown RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 ADRA2AP08913 450 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 CRHBPP24387 322 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 IFNA8P32881 189 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 CRISP1P54107 249 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 NCS1P62166 190 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 EMX1Q04741 257 aaPredicted RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 TCTE1Q5JU00 501 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 RNF165Q6ZSG1 346 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 GPR155Q7Z3F1 870 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 UBQLNLQ8IYU4 475 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms