RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ADAMTS14Q8WXS8 1223 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 ZSWIM3Q96MP5 696 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 KLHL28Q9NXS3 571 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CALML5Q9NZT1 146 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CES1P1Q9UKY3 287 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 MEIKINA0A087WXM9 373 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CIB4A0PJX0 185 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 PLPP2O43688 288 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 MPC2O95563 127 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 SULT1A3P0DMM9 295 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 SULT1A4P0DMN0 295 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CD53P19397 219 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CLCNKAP51800 687 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 PDX1P52945 283 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 DGCR2P98153 550 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CAMK2DQ13557 499 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 EXOSC2Q13868 293 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 FGFBP1Q14512 234 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 ST3GAL2Q16842 350 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 GSG1Q2KHT4 349 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 RNASE12Q5GAN4 147 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 C18orf63Q68DL7 685 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 MRM1Q6IN84 353 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 PXKQ7Z7A4 578 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 COX14Q96I36 57 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 CACNG6Q9BXT2 260 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC7A7Q9UM01 511 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 HCFC2Q9Y5Z7 792 aa18.23■□□□□ 0.51
PDLIM3-212ENST00000620787 SNRNP200O75643 2136 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 NUMA1Q14980 2115 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 GOLGA4Q13439 2230 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 GPR171O14626 319 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 CCR6P51684 374 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 SNTA1Q13424 505 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ZIC1Q15915 447 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 TMEM35AQ53FP2 167 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 METRNLQ641Q3 311 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 C16orf62Q7Z3J2 963 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 COMMD7Q86VX2 200 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ZNF687Q8N1G0 1237 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 OR10H4Q8NGA5 316 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 OR9A2Q8NGT5 310 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ABHD4Q8TB40 342 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 BRIX1Q8TDN6 353 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 OR52D1Q9H346 318 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ZMIZ1Q9ULJ6 1067 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 TMEM5Q9Y2B1 443 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ERI3O43414 337 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 SC5DO75845 299 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 CISD3P0C7P0 127 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ADRB3P13945 408 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 SDHBP21912 280 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 HIST1H1TP22492 207 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 BCL6P41182 706 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 HSF2Q03933 536 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC3A1Q07837 685 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 HSD17B12Q53GQ0 312 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 CLLU1Q5K131 121 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 FAM20CQ8IXL6 584 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 LSMEM1Q8N8F7 131 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ACOT4Q8N9L9 421 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 C17orf47Q8NEP4 570 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 HAVCR2Q8TDQ0 301 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 MS4A6EQ96DS6 147 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ELP4Q96EB1 424 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 GIMAP5Q96F15 307 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 C1QTNF2Q9BXJ5 285 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 ENKD1Q9H0I2 346 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 FN3KQ9H479 309 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 PRDM7Q9NQW5 492 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 DLL4Q9NR61 685 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 COPZ2Q9P299 210 aa18.22■□□□□ 0.51
PDLIM3-212ENST00000620787 DENND4AQ7Z401 1863 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 A0A1B0GVI7 797 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 REM1O75628 298 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 OR7A10O76100 309 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 MT-ND5P03915 603 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 F3P13726 295 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 FUT1P19526 365 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 CSNK2A2P19784 350 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 SSTR2P30874 369 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 ZNF81P51508 661 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 TRAM1Q15629 374 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 PCNPQ8WW12 178 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 GIMAP1Q8WWP7 306 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 VWCEQ96DN2 955 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 EVA1BQ9NVM1 165 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 ZNF443Q9Y2A4 671 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 NOTCH4Q99466 2003 aa18.21■□□□□ 0.51
PDLIM3-212ENST00000620787 BHLHE40O14503 412 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 H2AFB2P0C5Z0 115 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 HOXB3P14651 431 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 ATP5A1P25705 553 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 MMP15P51511 669 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 ST8SIA6P61647 398 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 PRDX1Q06830 199 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms