RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 TRAV27A0A087WT01 109 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 FAM183AA6NL82 134 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 MCIDASD6RGH6 385 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 EMX1Q04741 257 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-213ENST00000620219 DBPQ10586 325 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-213ENST00000620219 MLC1Q15049 377 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 PRICKLE4Q2TBC4 344 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 PRTGQ2VWP7 1150 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 B3GLCTQ6Y288 498 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 FRRS1Q6ZNA5 592 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 ENTHD1Q8IYW4 607 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 OR2L13Q8N349 312 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 TMEM203Q969S6 136 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 YTHDF1Q9BYJ9 559 aaKnown RBP14.57□□□□□ -0.08
CPSF1-213ENST00000620219 CHST8Q9H2A9 424 aa14.57□□□□□ -0.08
CPSF1-213ENST00000620219 PIP5K1CO60331 668 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 MPZL2O60487 215 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ATE1O95260 518 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 CD36P16671 472 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ARFIP1P53367 373 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ZNF628Q5EBL2 1059 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 DIO2Q92813 273 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 FUNDC2Q9BWH2 189 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 OCIAD1Q9NX40 245 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ATP1B1P05026 303 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 CDH11P55287 796 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 MAPK14Q16539 360 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 GXYLT1Q4G148 440 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 SARGQ9BW04 601 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 TMEM185BQ9H7F4 350 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 A0A087WUU8 490 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 PRAMEF27A3QJZ7 478 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 F10P00742 488 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 IFNGP01579 166 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 MRPL3P09001 348 aaKnown RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 CCL4P13236 92 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 MMP11P24347 488 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 SERPINB10P48595 397 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ARHGAP11BQ3KRB8 267 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 C3orf38Q5JPI3 329 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 USP51Q70EK9 711 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 P2RY8Q86VZ1 359 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 LINC00471Q8N535 108 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 TMEM105Q8N8V8 129 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 FLVCR1-AS1Q8TAF5 88 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ACOT11Q8WXI4 607 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 DSN1Q9H410 356 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ATP13A2Q9NQ11 1180 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 TEX51A0A1B0GUA7 166 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 DSCR3O14972 297 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 YKT6O15498 198 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 OXSR1O95747 527 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 GP1BBP13224 206 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 PCBP3P57721 371 aaKnown RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 DSG2Q14126 1118 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ELOAQ14241 798 aaKnown RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 TIGD6Q17RP2 521 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 ZHX1-C8orf76Q96EF9 292 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 LMF1Q96S06 567 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 NDEL1Q9GZM8 345 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-213ENST00000620219 PCDHGA6Q9Y5G7 932 aa14.56□□□□□ -0.08
CPSF1-213ENST00000620219 NADKO95544 446 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 CAPNS1P04632 268 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 HBQ1P09105 142 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ZGLP1P0C6A0 271 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ATP12AP54707 1039 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 CWF19L1Q69YN2 538 aaKnown RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 PIWIL3Q7Z3Z3 882 aaKnown RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 GDF7Q7Z4P5 450 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 C1GALT1C1Q96EU7 318 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 POLR2J2Q9GZM3 115 aaKnown RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 EPS8L2Q9H6S3 715 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 RPL36Q9Y3U8 105 aaKnown RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 MEN1O00255 615 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ASNA1O43681 348 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 RCBTB2O95199 551 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 MED26O95402 600 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 CBX7O95931 251 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 GGT2P36268 569 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 PRICKLE2Q7Z3G6 844 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ZAR1Q86SH2 424 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 WDR5BQ86VZ2 330 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ZNF321PQ8N8H1 164 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 OR51G2Q8NGK0 314 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 OR4C3Q8NH37 302 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 LCORQ96JN0 433 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ERMAPQ96PL5 475 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 UBQLN4Q9NRR5 601 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 UNC119BA6NIH7 251 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 H3BMQ9 156 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 SLC16A6O15403 523 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 ELAVL1Q15717 326 aaKnown RBP14.55□□□□□ -0.08
CPSF1-213ENST00000620219 OGFOD3Q6PK18 319 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 COG8Q96MW5 612 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 VN1R1Q9GZP7 353 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 KLHL1Q9NR64 748 aa14.55□□□□□ -0.08
CPSF1-213ENST00000620219 SH3PXD2BA1X283 911 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms