RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 TLE2Q04725 743 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF697Q5TEC3 545 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRAMEF13Q5VWM6 474 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 HEPHL1Q6MZM0 1159 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM17Q86X19 198 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 PLA2G15Q8NCC3 412 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 SORCS1Q8WY21 1168 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 HGDQ93099 445 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 SCAMP4Q969E2 229 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 YIPF5Q969M3 257 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 FUBP3Q96I24 572 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 C7orf50Q9BRJ6 194 aaKnown RBP9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 ABCG4Q9H172 646 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM231Q9H6L2 316 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 MBD2Q9UBB5 411 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 AUP1Q9Y679 476 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
TNFAIP3-210ENST00000620204 RNASET2O00584 256 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 TBL1XO60907 577 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC16A8O95907 504 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF8P17098 575 aaPredicted RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 HOXB9P17482 250 aaPredicted RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 CORO1AP31146 461 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 CCR8P51685 355 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 CHCHD4Q8N4Q1 142 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR4D11Q8NGI4 311 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR8S1Q8NH09 359 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 NSMAFQ92636 917 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 LRIG1Q96JA1 1093 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 SPATA5L1Q9BVQ7 753 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ESRP2Q9H6T0 727 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRIM36Q9NQ86 728 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 WSB2Q9NYS7 404 aaPredicted RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 MARK1Q9P0L2 795 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 FBXL3Q9UKT7 428 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 SCML2Q9UQR0 700 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ASCC3Q8N3C0 2202 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 GJB5O95377 273 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 GYPBP06028 91 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 C8GP07360 202 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ACP5P13686 325 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 PPP3CBP16298 524 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 RFX3P48380 749 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 HMGA2P52926 109 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 UBE2IP63279 158 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 SERTAD2Q14140 314 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 RBMS2Q15434 407 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ACSM3Q53FZ2 586 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 HECTD3Q5T447 861 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 C6orf120Q7Z4R8 191 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 RASGRP3Q8IV61 690 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 CYB561A3Q8NBI2 242 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 GPR32P1Q8NGA4 272 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR51L1Q8NGJ5 315 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR5W2Q8NH69 310 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 THAP4Q8WY91 577 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ECHDC3Q96DC8 303 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 TCEAL4Q96EI5 215 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 SMG9Q9H0W8 520 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZCCHC4Q9H5U6 513 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 CXorf36Q9H7Y0 433 aa9.15□□□□□ -0.94
TNFAIP3-210ENST00000620204 LRIT2A6NDA9 550 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 SUSD5O60279 629 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 DPM1O60762 260 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 PRAMEF2O60811 474 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 CLDN11O75508 207 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 RAP2BP61225 183 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 TAF13Q15543 124 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 SLC36A2Q495M3 483 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 MINDY4Q4G0A6 757 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 OVCH2Q7RTZ1 564 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 ZNF280BQ86YH2 543 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 CMIPQ8IY22 773 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 LILRA3Q8N6C8 439 aaPredicted RBP9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 L3MBTL4Q8NA19 623 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 OR6T1Q8NGN1 323 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 C3orf49Q96BT1 292 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 SLC25A18Q9H1K4 315 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 KLHL31Q9H511 634 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 DYRK1BQ9Y463 629 aa9.15□□□□□ -0.95
TNFAIP3-210ENST00000620204 GPR37L1O60883 481 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 CATP04040 527 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 HMGN1P05114 100 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 TRIM23P36406 574 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 CDH4P55283 916 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 GPR33Q49SQ1 333 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 PIP5KL1Q5T9C9 394 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 ZSCAN1Q8NBB4 408 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 ZNF740Q8NDX6 193 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 OR52I2Q8NH67 350 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 NEIL2Q969S2 332 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 MRPS24Q96EL2 167 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 ZC3H10Q96K80 434 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 GAS2L1Q99501 681 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 SOSTQ9BQB4 213 aa9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 TESQ9UGI8 421 aaKnown RBP9.14□□□□□ -0.95
TNFAIP3-210ENST00000620204 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms