RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CHEK1O14757 476 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 CDC123O75794 336 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-208ENST00000618395 AGXTP21549 392 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 HNRNPA2B1P22626 353 aaKnown RBP14.24□□□□□ -0.13
COL5A1-208ENST00000618395 L1CAMP32004 1257 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 OR52W1Q6IF63 320 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 ANKK1Q8NFD2 765 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 RCE1Q9Y256 329 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 F6UZH7 168 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 ALPLP05186 524 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 HIST1H3AP68431 136 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF836Q6ZNA1 936 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 PIM3Q86V86 326 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF680Q8NEM1 530 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 FAM3CQ92520 227 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 MIB2Q96AX9 1013 aa14.24□□□□□ -0.13
COL5A1-208ENST00000618395 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 KRTDAPP60985 99 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 CEACAM7Q14002 265 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF461Q8TAF7 563 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 BPIFA2Q96DR5 249 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 IL17RBQ9NRM6 502 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 CNTNAP1P78357 1384 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 HLA-DMAP28067 261 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GDI1P31150 447 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 CCKARP32238 428 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 BACE1P56817 501 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 C6orf136Q5SQH8 315 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 VWA1Q6PCB0 445 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 RGL4Q8IZJ4 473 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 Q9N2J8 555 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 SLIT1O75093 1534 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GRM6O15303 877 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GGT5P36269 586 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GPR50Q13585 617 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 RPE65Q16518 533 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 MICAQ29983 383 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 CA5BP1Q8WTZ4 195 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 HMCESQ96FZ2 354 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 FAM103A1Q9BTL3 118 aaKnown RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 OR2AG1Q9H205 316 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 STYXL1Q9Y6J8 313 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 TTPALQ9BTX7 342 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 SPACA1Q9HBV2 294 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 FZD10Q9ULW2 581 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 ZFP92A6NM28 416 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 TSFMP43897 325 aaKnown RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 RAB11AP62491 216 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 PLBD1Q6P4A8 553 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 COMMD1Q8N668 190 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 OR2D3Q8NGH3 330 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 ATXN7L1Q9ULK2 861 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GPR52Q9Y2T5 361 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 A0A1W2PQ45 241 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 A0A1W2PQY0 241 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 GPR143P51810 404 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 BTG1P62324 171 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 IL10RBQ08334 325 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 RAB40BQ12829 278 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF154Q13106 437 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 HAO2Q9NYQ3 351 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 CLCF1Q9UBD9 225 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 NQO2P16083 231 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 UQCC3Q6UW78 93 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 SLC43A2Q8N370 569 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 TLE6Q9H808 572 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 MYEF2Q9P2K5 600 aaKnown RBP14.23□□□□□ -0.13
COL5A1-208ENST00000618395 V9GY05 133 aa14.23□□□□□ -0.13
COL5A1-208ENST00000618395 LIPCP11150 499 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 FABP4P15090 132 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF25P17030 456 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PTNP21246 168 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 SHFQ7M4L6 423 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 ARL6IP6Q8N6S5 226 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 BRI3BPQ8WY22 251 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 C11orf49Q9H6J7 331 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 SGCBQ16585 318 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PHOSPHO1Q8TCT1 267 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 DUSP19Q8WTR2 217 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 MCOLN1Q9GZU1 580 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 NMNAT1Q9HAN9 279 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 C2orf42Q9NWW7 574 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 GPR4P46093 362 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 NOXRED1Q6NXP6 359 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 ZFAND4Q86XD8 727 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 OR52E2Q8NGJ4 325 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 OR6M1Q8NGM8 313 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 OR1S2Q8NGQ3 325 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PGAM5Q96HS1 289 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 AHSGP02765 367 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 HPNP05981 417 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 ENDOGQ14249 297 aaKnown RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 FCN2Q15485 313 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 DHRS11Q6UWP2 260 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 LARP4Q71RC2 724 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 OR10D4PQ8NGN7 298 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms