RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PHF11Q9UIL8 331 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 ADAM21Q9UKJ8 722 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 KLF13Q9Y2Y9 288 aaPredicted RBP4.18□□□□□ -1.74
CUL3-216ENST00000617432 YARS2Q9Y2Z4 477 aaKnown RBP4.18□□□□□ -1.74
CUL3-216ENST00000617432 MEMO1Q9Y316 297 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 PLLPQ9Y342 182 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 FIS1Q9Y3D6 152 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 POLR3HQ9Y535 204 aaPredicted RBP4.18□□□□□ -1.74
CUL3-216ENST00000617432 PCDHGB6Q9Y5F9 930 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 CSMD1Q96PZ7 3565 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 SPTAN1Q13813 2472 aaKnown RBP4.18□□□□□ -1.74
CUL3-216ENST00000617432 DOPEY1Q5JWR5 2465 aa4.18□□□□□ -1.74
CUL3-216ENST00000617432 ZGRF1Q86YA3 2104 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 EXPH5Q8NEV8 1989 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 IQANK1A0A1B0GTG1 560 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 A0A1B0GUH1 482 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NKX2-6A6NCS4 301 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 ALG1L2C9J202 215 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NPIPA2E9PIF3 369 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NPIPA3F8WFD2 350 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 PLIN3O60664 434 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 GLRA3O75311 464 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 ULK1O75385 1050 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 SEMA3DO95025 777 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 OTCP00480 354 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CPMP14384 443 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 ABOP16442 354 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 EFNA1P20827 205 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 IMPDH1P20839 514 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 GPX3P22352 226 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 TCEA1P23193 301 aaKnown RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 GATA3P23771 443 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 HMOX2P30519 316 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 PTGDSP41222 190 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 TRPC1P48995 793 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 XKP51811 444 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 MAPK12P53778 367 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NAGLUP54802 743 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NUP107P57740 925 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 PPIAP62937 165 aaKnown RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 PHEXP78562 749 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 MPEG1Q2M385 716 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 PRICKLE4Q2TBC4 344 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CD300EQ496F6 205 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 RTL6Q6ICC9 239 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 SLC48A1Q6P1K1 146 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NPSR1Q6W5P4 371 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 RTL4Q6ZR62 310 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 FAM47EQ6ZV65 393 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 TRILQ7L0X0 811 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CCDC91Q7Z6B0 441 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CCDC71Q8IV32 467 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 C10orf107Q8IVU9 208 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 ST13P4Q8IZP2 240 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 GHDCQ8N2G8 530 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CLRN3Q8NCR9 226 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 SRFBP1Q8NEF9 429 aaKnown RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 OR4N2Q8NGD1 307 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 OR52R1Q8NGF1 315 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CLHC1Q8NHS4 586 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NUBPLQ8TB37 319 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 METTL6Q8TCB7 284 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 AGR3Q8TD06 166 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 C16orf78Q8WTQ4 265 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 HOXB13Q92826 284 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 KAT2AQ92830 837 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 TANKQ92844 425 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 EXOSC8Q96B26 276 aaKnown RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 REPS1Q96D71 796 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 SPACA9Q96E40 222 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 L3HYPDHQ96EM0 354 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 C11orf24Q96F05 449 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 OTUB1Q96FW1 271 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 EGLN2Q96KS0 407 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 JSRP1Q96MG2 331 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 RTN4RQ9BZR6 473 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 TUBB1Q9H4B7 451 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 COPS7AQ9UBW8 275 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 DLGAP4Q9Y2H0 992 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CCL27Q9Y4X3 112 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 FAM215AQ9Y5M1 114 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 SPACA6W5XKT8 324 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 SVILO95425 2214 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 NCOA6Q14686 2063 aaPredicted RBP4.17□□□□□ -1.74
CUL3-216ENST00000617432 CNTRLQ7Z7A1 2325 aa4.17□□□□□ -1.74
CUL3-216ENST00000617432 CSMD2Q7Z408 3487 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 POLEQ07864 2286 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 C2orf92A0A1B0GVN3 265 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 KLRC4-KLRK1H3BQV0 150 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 UGT2B11O75310 529 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 LYPLA1O75608 230 aaPredicted RBP4.16□□□□□ -1.74
CUL3-216ENST00000617432 SLC35E2P0CK97 266 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 MYL2P10916 166 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 COX7A2P14406 83 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 TAC1P20366 129 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 CNR1P21554 472 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 PIK3R1P27986 724 aa4.16□□□□□ -1.74
CUL3-216ENST00000617432 ABCD3P28288 659 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms