RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TACR3P29371 465 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SFTPDP35247 375 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 KCTD21Q4G0X4 260 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ARSHQ5FYA8 562 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ANKRD13BQ86YJ7 626 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 LMNTD1Q8N9Z9 388 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SMAD5Q99717 465 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 MUC13Q9H3R2 512 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SLAMF8Q9P0V8 285 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 DAPK2Q9UIK4 370 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GYG2O15488 501 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SNHG28P0DPA3 235 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 VDAC1P21796 283 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GPR176Q14439 515 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CYP1B1Q16678 543 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 DEFB110Q30KQ9 67 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 PAN3Q58A45 887 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 ATG4AQ8WYN0 398 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SH3YL1Q96HL8 342 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 SLC30A3Q99726 388 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 C7orf50Q9BRJ6 194 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 OAZ2O95190 189 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CRABP1P29762 137 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SSX2Q16385 188 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ARCQ7LC44 396 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 NR2C2APQ86WQ0 139 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OR5D16Q8NGK9 328 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 LNX1Q8TBB1 728 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 SLC46A1Q96NT5 459 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OR10A5Q9H207 317 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OR10A2Q9H208 303 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MEAF6Q9HAF1 191 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CACFD1Q9UGQ2 172 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MAGEL2Q9UJ55 1249 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CAPN6Q9Y6Q1 641 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MAGEB17A8MXT2 336 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ANKRD66B4E2M5 251 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 B8ZZF3 427 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 EDF1O60869 148 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 SORBS2O94875 1100 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 OR5F1O95221 314 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACTL6AO96019 429 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CSNK1DP48730 415 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 BMXP51813 675 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACTA2P62736 377 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACTG2P63267 376 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RAB31Q13636 194 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SMAD1Q15797 465 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 PTPN20Q4JDL3 420 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GDPGP1Q6ZNW5 385 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OVCH1Q7RTY7 1134 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TCEANCQ8N8B7 351 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CT55Q8WUE5 264 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MRPL57Q9BQC6 102 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF649Q9BS31 505 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DEFB127Q9H1M4 99 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACSL6Q9UKU0 697 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SARDHQ9UL12 918 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ADAP00813 363 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IDO1P14902 403 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NBL1P41271 181 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PITPNAQ00169 270 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DSC2Q02487 901 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF844Q08AG5 666 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZSCAN26Q16670 478 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PPP1R3AQ16821 1122 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TMEM119Q4V9L6 283 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PHF13Q86YI8 300 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 EXTL1Q92935 676 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 POM121Q96HA1 1249 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MRGPRX3Q96LB0 322 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TCF7L1Q9HCS4 588 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC7A8Q9UHI5 535 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLCO3A1Q9UIG8 710 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR1A2Q9Y585 309 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TRBV23-1A0A0A0MS06 115 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FOXH1O75593 365 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACADSP16219 412 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CASP1P29466 404 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 APOBEC3AP31941 199 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC1A6P48664 564 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ATP4BP51164 291 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SCN1BQ07699 218 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PLCXD3Q63HM9 321 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GALNT5Q7Z7M9 940 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 VSTM4Q8IW00 320 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR13H1Q8NG92 308 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACMSDQ8TDX5 336 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TTYH2Q9BSA4 534 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RBM4Q9BWF3 364 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC34A2O95436 690 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CD99P14209 185 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CD9P21926 228 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 EFNA3P52797 238 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF546Q86UE3 836 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FAM185AQ8N0U4 392 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CHST14Q8NCH0 376 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR2T6Q8NHC8 308 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MPP4Q96JB8 637 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR4C12Q96R67 309 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms