RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 H0YC42 278 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 C16orf97H3BN30 126 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 EIF1AYO14602 144 aaKnown RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 BIRC5O15392 142 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 RGS16O15492 202 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 CFLARO15519 480 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PLGP00747 810 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 CGAP01215 116 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 HRGP04196 525 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TUBBP07437 444 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PABPC4LP0CB38 370 aaKnown RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 POU2F1P14859 743 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 IL11P20809 199 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 ADH6P28332 368 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 CPOXP36551 454 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 ETV4P43268 484 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 KCNJ5P48544 419 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TPD52P55327 224 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 CLDN8P56748 225 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 C21orf58P58505 322 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PPP2R2AP63151 447 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 EMX2Q04743 252 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 LASP1Q14847 261 aaKnown RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PTGR1Q14914 329 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 SPDYE7PQ495Y7 208 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 VWA1Q6PCB0 445 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PAMR1Q6UXH9 720 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 ESPNLQ6ZVH7 1005 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 CROCCP2Q86T23 111 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 GGNQ86UU5 652 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TGIF2LYQ8IUE0 185 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 OR5M1Q8NGP8 315 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 B4GALNT2Q8NHY0 566 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 FNDC9Q8TBE3 224 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 SFXN5Q8TD22 340 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 GMPPAQ96IJ6 420 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 C3orf30Q96M34 536 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TMUB1Q9BVT8 246 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PLEKHF2Q9H8W4 249 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TIGARQ9NQ88 270 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PLSCR4Q9NRQ2 329 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 MED17Q9NVC6 651 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 ASIC5Q9NY37 505 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 NOP53Q9NZM5 478 aaKnown RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 PROCRQ9UNN8 238 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-218ENST00000617172 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 TESMINQ9Y4I5 508 aa8.7□□□□□ -1.02
TARDBP-218ENST00000617172 GJE1A6NN92 205 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GTPBP1O00178 669 aaKnown RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 TM9SF1O15321 606 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GMFGO60234 142 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 SYNGR4O95473 234 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 SERPINE1P05121 402 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 MYZAPP0CAP1 466 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 PPP3CBP16298 524 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 EFNA1P20827 205 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 PSMA4P25789 261 aaKnown RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 ELK4P28324 431 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 UGT2B10P36537 528 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 EIF1AXP47813 144 aaKnown RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 SUMO3P55854 103 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 CTBP2P56545 445 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 DEFB113Q30KQ7 82 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 PLPPR5Q32ZL2 321 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 KLHL26Q53HC5 615 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 DCST2Q5T1A1 773 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GALNT10Q86SR1 603 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GATSQ8NAP1 163 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 OR6K3Q8NGY3 331 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 OR10D3Q8NH80 312 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 FBXO30Q8TB52 745 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 PHOSPHO1Q8TCT1 267 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 CDS1Q92903 461 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 REXO5Q96IC2 774 aaKnown RBP8.69□□□□□ -1.02
TARDBP-218ENST00000617172 RNF145Q96MT1 663 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 WFIKKN1Q96NZ8 548 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 MED18Q9BUE0 208 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 C1orf50Q9BV19 199 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 GPATCH2Q9NW75 528 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 FBXO34Q9NWN3 711 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 PCDHGB4Q9UN71 923 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 MED12Q93074 2177 aa8.69□□□□□ -1.02
TARDBP-218ENST00000617172 RNASET2O00584 256 aaKnown RBP8.68□□□□□ -1.02
TARDBP-218ENST00000617172 SS18L1O75177 396 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-218ENST00000617172 SKAP2O75563 359 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-218ENST00000617172 AQP8O94778 261 aa8.68□□□□□ -1.02
TARDBP-218ENST00000617172 ATE1O95260 518 aa8.68□□□□□ -1.02
TARDBP-218ENST00000617172 NUDT14O95848 222 aa8.68□□□□□ -1.02
TARDBP-218ENST00000617172 C6orf47O95873 294 aa8.68□□□□□ -1.02
TARDBP-218ENST00000617172 AGR2O95994 175 aa8.68□□□□□ -1.02
TARDBP-218ENST00000617172 AK1P00568 194 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms