RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 LRRN1Q6UXK5 716 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 PROSER1Q86XN7 944 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 THNSL2Q86YJ6 484 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 SPEM1Q8N4L4 309 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ORC6Q9Y5N6 252 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ZNF292O60281 2723 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 MYO1GB0I1T2 1018 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ADAM10O14672 748 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 TCF21O43680 179 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 DTYMKP23919 212 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 MTAPQ13126 283 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 INTS6LQ5JSJ4 861 aaKnown RBP14.34□□□□□ -0.11
NOP56-220ENST00000616692 FAM78AQ5JUQ0 283 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 C10orf91Q5T1B1 145 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 SLC30A6Q6NXT4 461 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 IL20RBQ6UXL0 311 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 PXKQ7Z7A4 578 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 Q8N402 240 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 OR4F6Q8NGB9 312 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ZNF675Q8TD23 568 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ZNF516Q92618 1163 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 CPNE2Q96FN4 548 aaPredicted RBP14.34□□□□□ -0.11
NOP56-220ENST00000616692 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 ASPNQ9BXN1 380 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 SAE1Q9UBE0 346 aaPredicted RBP14.34□□□□□ -0.11
NOP56-220ENST00000616692 CHRNA9Q9UGM1 479 aa14.34□□□□□ -0.11
NOP56-220ENST00000616692 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
NOP56-220ENST00000616692 ISM1B1AKI9 464 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CYB5R3P00387 301 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 SERPINA1P01009 418 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PMP2P02689 132 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CTXN2P0C2S0 81 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 GABRA1P14867 456 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 NCK1P16333 377 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 NDUFV2P19404 249 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 MMP12P39900 470 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PMELP40967 661 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PRRX1P54821 245 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ABLIM2Q6H8Q1 611 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CAPN13Q6MZZ7 669 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 TMEM108Q6UXF1 575 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ZNF283Q8N7M2 679 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ATP6V1C2Q8NEY4 427 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 OR10K1Q8NGX5 313 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 OR2G2Q8NGZ5 317 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PCDH19Q8TAB3 1148 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 C9orf43Q8TAL5 461 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 FAM3CQ92520 227 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 HIST1H2BAQ96A08 127 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 LOXL4Q96JB6 756 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 MTERF1Q99551 399 aaKnown RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 CGRRF1Q99675 332 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 ELOVL4Q9GZR5 314 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CDT1Q9H211 546 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PPP1R3EQ9H7J1 279 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 POPDC2Q9HBU9 364 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 TRPC4Q9UBN4 977 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 BLACEA4D250 179 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 BBIP1A8MTZ0 92 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 C5orf58C9J3I9 102 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PGRMC2O15173 223 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PROSCO94903 275 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ANXA5P08758 320 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 HOXB5P09067 269 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 HOXA5P20719 270 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 PTPN3P26045 913 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CDX1P47902 265 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 INPP1P49441 399 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 EVX1P49640 407 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 MRPS10P82664 201 aaKnown RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 NPRL3Q12980 569 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 GBX1Q14549 363 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 CSRP2Q16527 193 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 TRIM61Q5EBN2 209 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ANKRD34AQ69YU3 496 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 H3F3CQ6NXT2 135 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 TECPR1Q7Z6L1 1165 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 VRK3Q8IV63 474 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 TMEM209Q96SK2 561 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 MGME1Q9BQP7 344 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 TMED9Q9BVK6 235 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 UBP1Q9NZI7 540 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 ZIM2Q9NZV7 527 aa14.33□□□□□ -0.12
NOP56-220ENST00000616692 GDF2Q9UK05 429 aaPredicted RBP14.33□□□□□ -0.12
NOP56-220ENST00000616692 AHSA1O95433 338 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 PPP3CBP16298 524 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 CEACAM8P31997 349 aaPredicted RBP14.32□□□□□ -0.12
NOP56-220ENST00000616692 CCR4P51679 360 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 RAC3P60763 192 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 HSD11B2P80365 405 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 HTD2P86397 168 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.32□□□□□ -0.12
NOP56-220ENST00000616692 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 LANCL3Q6ZV70 420 aa14.32□□□□□ -0.12
NOP56-220ENST00000616692 P4HA3Q7Z4N8 544 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms