RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNHIT3Q15649 155 aaPredicted RBP17.08■□□□□ 0.32
CDX1-202ENST00000616154 SHEQ5VZ18 495 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 VWA1Q6PCB0 445 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 RIMKLAQ8IXN7 391 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 UBQLNLQ8IYU4 475 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 NATD1Q8N6N6 113 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 CNEP1R1Q8N9A8 125 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 SDHAF3Q9NRP4 125 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 SIRT3Q9NTG7 399 aaPredicted RBP17.08■□□□□ 0.32
CDX1-202ENST00000616154 FAM120CQ9NX05 1096 aaKnown RBP17.08■□□□□ 0.32
CDX1-202ENST00000616154 SH3BP4Q9P0V3 963 aa17.08■□□□□ 0.32
CDX1-202ENST00000616154 LINC01387J3KSC0 135 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
CDX1-202ENST00000616154 SMNDC1O75940 238 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDX1-202ENST00000616154 HK1P19367 917 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 DRD4P21917 467 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 HPCAL1P37235 193 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 CD79BP40259 229 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 MANFP55145 182 aaKnown RBP17.07■□□□□ 0.32
CDX1-202ENST00000616154 CLDN15P56746 228 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 NKX6-1P78426 367 aaPredicted RBP17.07■□□□□ 0.32
CDX1-202ENST00000616154 PTGR1Q14914 329 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 DECR1Q16698 335 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 RAET1LQ5VY80 246 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 ZCCHC12Q6PEW1 402 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 MAVSQ7Z434 540 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 WDR75Q8IWA0 830 aaKnown RBP17.07■□□□□ 0.32
CDX1-202ENST00000616154 CDRT4Q8N9R6 151 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 FNDC5Q8NAU1 212 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 COQ8BQ96D53 544 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 MS4A4EQ96PG1 132 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 FLRT3Q9NZU0 649 aa17.07■□□□□ 0.32
CDX1-202ENST00000616154 MRTO4Q9UKD2 239 aaKnown RBP17.07■□□□□ 0.32
CDX1-202ENST00000616154 DEFB108AA8MXU0 73 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 SIAH2O43255 324 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 TNFRSF21O75509 655 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 INHBBP09529 407 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 PRPS1L1P21108 318 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 KIR2DL2P43627 348 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 PSMD4P55036 377 aaKnown RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 EMX2Q04743 252 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 MAD2L1Q13257 205 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 VPS26BQ4G0F5 336 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 IL23RQ5VWK5 629 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 ZNF474Q6S9Z5 364 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 BTLAQ7Z6A9 289 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 FIG4Q92562 907 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 TUBGCP3Q96CW5 907 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 WFIKKN1Q96NZ8 548 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 PIP5K1AQ99755 562 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 SIKE1Q9BRV8 207 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 PTGES2Q9H7Z7 377 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 MEAF6Q9HAF1 191 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 C3orf14Q9HBI5 128 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 ELOVL5Q9NYP7 299 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 ZNF226Q9NYT6 803 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 MED11Q9P086 117 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 C6orf203Q9P0P8 240 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 ZNF337Q9Y3M9 751 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 ZNF175Q9Y473 711 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
CDX1-202ENST00000616154 RAI1Q7Z5J4 1906 aaPredicted RBP17.06■□□□□ 0.32
CDX1-202ENST00000616154 IGLV3-32A0A0A0MS00 114 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 EMC8O43402 210 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 NGFRP08138 427 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 LAMP1P11279 417 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 CCKARP32238 428 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 GPC1P35052 558 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 SUCLG1P53597 346 aaKnown RBP17.05■□□□□ 0.32
CDX1-202ENST00000616154 LTBQ06643 244 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 STX5Q13190 355 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 FGFBP1Q14512 234 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 MFSD12Q6NUT3 480 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 LRRC75A-AS1Q8N1F1 130 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 NUP43Q8NFH3 380 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 OR7A2PQ8NGA2 310 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 FAM110BQ8TC76 370 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 C1GALT1C1Q96EU7 318 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 MAELQ96JY0 434 aaKnown RBP17.05■□□□□ 0.32
CDX1-202ENST00000616154 SMR3AQ99954 134 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 C1orf50Q9BV19 199 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 RTN4RQ9BZR6 473 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 OPN3Q9H1Y3 402 aaPredicted RBP17.05■□□□□ 0.32
CDX1-202ENST00000616154 RNF122Q9H9V4 155 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 ATAD3AQ9NVI7 634 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 KLHL28Q9NXS3 571 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 DSCAMO60469 2012 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 HEATR5AQ86XA9 2040 aa17.05■□□□□ 0.32
CDX1-202ENST00000616154 OR2M5A3KFT3 312 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 H0YC42 278 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 SEC14L5O43304 696 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 ARHGEF9O43307 516 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 CGAP01215 116 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 IGKV1D-16P01601 117 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 KITP10721 976 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 CD8BP10966 210 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 CRYGSP22914 178 aa17.04■□□□□ 0.32
CDX1-202ENST00000616154 ADSLP30566 484 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms