RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 LOC730098B7Z3J9 87 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 I6L893 689 aaPredicted RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 SERPINA2P20848 420 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 RAP2BP61225 183 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 HERVK_113P63132 956 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 Q6ZVL8 140 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■□□□ 14.2
TCF4-248ENST00000616053 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ERP29P30040 261 aaKnown RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 TEKQ02763 1124 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SLC14A1Q13336 389 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SLC22A6Q4U2R8 563 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ZNF648Q5T619 568 aaPredicted RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 HMGN2P46Q86SG4 172 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ADGRF3Q8IZF5 1079 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 OR1N1Q8NGS0 311 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ZNF705GA8MUZ8 300 aaPredicted RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 MCRIP1C9JLW8 97 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 BET1O15155 118 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 UCHL1P09936 223 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 OR5I1Q13606 314 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 VWA5B1Q5TIE3 1220 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 PODNL1Q6PEZ8 512 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SMOQ99835 787 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ADAM19Q9H013 955 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 STUB1Q9UNE7 303 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ATG4BQ9Y4P1 393 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 PRSS12P56730 875 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SIRPB2Q5JXA9 342 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 UNC5DQ6UXZ4 953 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SERPINA12Q8IW75 414 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ZIM2Q9NZV7 527 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 AQP2P41181 271 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SMAD2Q15796 467 aaKnown RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR6C1Q96RD1 312 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 TMEM246Q9BRR3 403 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 DPCDQ9BVM2 203 aaPredicted RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 SLC25A31Q9H0C2 315 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 VRTNQ9H8Y1 702 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 KLK10O43240 276 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FBXL22Q6P050 247 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SLC5A6Q9Y289 635 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 PXDNLA1KZ92 1463 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 M0R1B8 84 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FADS1O60427 444 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 AGFG2O95081 481 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 GKP32189 559 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SHEQ5VZ18 495 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 DCAF4L2Q8NA75 395 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR4K1Q8NGD4 311 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SFXN5Q8TD22 340 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 AKTIPQ9H8T0 292 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FIGNL2A6NMB9 653 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 LATO43561 262 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FAM155BO75949 473 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ABHD2P08910 425 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 UBL4AP11441 157 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 GATMP50440 423 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 GLO1Q04760 184 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 RNLSQ5VYX0 342 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 RLN3Q8WXF3 142 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 UBE2FQ969M7 185 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SAMD8Q96LT4 415 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 YJEFN3A6XGL0 299 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 GOSR2O14653 212 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 RFPL2O75678 378 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR8U8P0C7N1 319 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ELK4P28324 431 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 HOXC8P31273 242 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 BMPR1AP36894 532 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 CPNE8Q86YQ8 564 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SFTPA2Q8IWL1 248 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SFTPA1Q8IWL2 248 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR5AK2Q8NH90 309 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ARSGQ96EG1 525 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FAM120CQ9NX05 1096 aaKnown RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 TUBA8Q9NY65 449 aaPredicted RBP11.94□□□□□ -0.5
TCF4-248ENST00000616053 PADI1Q9ULC6 663 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 RAB3BP20337 219 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR2T5Q6IEZ7 315 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 FJX1Q86VR8 437 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms