RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 C3P1Q6ZMU1 363 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 LRRC28Q86X40 367 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 CBARPQ8N350 705 aaPredicted RBP12.31□□□□□ -0.44
MSH6-214ENST00000616033 OR52B4Q8NGK2 314 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 TMEM255BQ8WV15 326 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ARL6Q9H0F7 186 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 NT5DC2Q9H857 520 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 MAN2C1Q9NTJ4 1040 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ERVK-19Q9WJR5 959 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ZNF175Q9Y473 711 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 YIPF1Q9Y548 306 aa12.31□□□□□ -0.44
MSH6-214ENST00000616033 ASCC3Q8N3C0 2202 aaKnown RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 K7ESM1 405 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SEC14L5O43304 696 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SGCEO43556 437 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 UGDHO60701 494 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 KLHL18O94889 574 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 RLN1P04808 185 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 HMGN2P05204 90 aaKnown RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 GALTP07902 379 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ANXA7P20073 488 aaKnown RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 HSD3B2P26439 372 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 MAPK9P45984 424 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR12D2P58182 307 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR5M10Q6IEU7 315 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ZNF322Q6U7Q0 402 aaPredicted RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 CXXC5Q7LFL8 322 aaKnown RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 MED18Q9BUE0 208 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 HCAR1Q9BXC0 346 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 DPH1Q9BZG8 443 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SLC25A18Q9H1K4 315 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 EMC7Q9NPA0 242 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR6C74A6NCV1 312 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 H7C4K7 107 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 CHRM4P08173 479 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 HOXC8P31273 242 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 SSR2P43308 183 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 CDK5Q00535 292 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 CAMK1Q14012 370 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 OR5W2Q8NH69 310 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 RFKQ969G6 155 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SCMH1Q96GD3 660 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SLC6A17Q9H1V8 727 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ZNF334Q9HCZ1 680 aaPredicted RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 MYNNQ9NPC7 610 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 C1orf105O95561 183 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ADRB1P08588 477 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 CLTBP09497 229 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 NOS3P29474 1203 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 RAD52P43351 418 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 GAS1P54826 345 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 TP53I3Q53FA7 332 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 CDKL4Q5MAI5 379 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 NXPE4Q6UWF7 544 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ARL14Q8N4G2 192 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 TBC1D19Q8N5T2 526 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 GOT1L1Q8NHS2 421 aaPredicted RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 EFCAB11Q9BUY7 163 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 TEX12Q9BXU0 123 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 ZNF436Q9C0F3 470 aaPredicted RBP12.3□□□□□ -0.44
MSH6-214ENST00000616033 CYSLTR2Q9NS75 346 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
MSH6-214ENST00000616033 KIAA0100Q14667 2235 aaKnown RBP12.29□□□□□ -0.44
MSH6-214ENST00000616033 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 A8MVJ9 347 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 LATO43561 262 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 TMPRSS11DO60235 418 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 SOX30O94993 753 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 LPLP06858 475 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
MSH6-214ENST00000616033 ZP1P60852 638 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 PSMA6P60900 246 aaKnown RBP12.29□□□□□ -0.44
MSH6-214ENST00000616033 GSG1Q2KHT4 349 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 CLLU1Q5K131 121 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 EOGTQ5NDL2 527 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 METAP1DQ6UB28 335 aaPredicted RBP12.29□□□□□ -0.44
MSH6-214ENST00000616033 ACBD7Q8N6N7 88 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 OR56A3Q8NH54 315 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 NEURL3Q96EH8 262 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 C4orf36Q96KX1 117 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 SOSTQ9BQB4 213 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 ENKD1Q9H0I2 346 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms