RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 RELTQ969Z4 430 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ELP4Q96EB1 424 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 APIPQ96GX9 242 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TEPSINQ96N21 525 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ARHGAP9Q9BRR9 750 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PDLIM7Q9NR12 457 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 SRPK3Q9UPE1 567 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ARFGEF1Q9Y6D6 1849 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PRAMEF26H0Y7S4 382 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TSPAN15O95858 294 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CD70P32970 193 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 BMXP51813 675 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 WDR5P61964 334 aaKnown RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 GPR176Q14439 515 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 NR0B2Q15466 257 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CDHR3Q6ZTQ4 885 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 NOXA1Q86UR1 476 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 B3GNT7Q8NFL0 401 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 OR5D14Q8NGL3 314 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 OR9A2Q8NGT5 310 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 UBTD2Q8WUN7 234 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 DCUN1D4Q92564 292 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 GCDHQ92947 438 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 PTERQ96BW5 349 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 MSLNLQ96KJ4 702 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TIMM29Q9BSF4 260 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ASF1BQ9NVP2 202 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 GLTPQ9NZD2 209 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 A0A1W2PPK0 400 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 hCG_1807616A0A1W2PRN6 198 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 DRGXA6NNA5 263 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 HNRNPA2B1P22626 353 aaKnown RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 SLC2A5P22732 501 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 IVDP26440 423 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 HOXA11P31270 313 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 CTHP32929 405 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CA5AP35218 305 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CAV3P56539 151 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ZNF252P-AS1Q0IIN9 211 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 MLLT11Q13015 90 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 HES5Q5TA89 166 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 WDR88Q6ZMY6 472 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 VASH1Q7L8A9 365 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 FNDC9Q8TBE3 224 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 BRIX1Q8TDN6 353 aaKnown RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 TCTEX1D2Q8WW35 142 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TSACCQ96A04 125 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 KCTD12Q96CX2 325 aaKnown RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 DTD2Q96FN9 168 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 COQ10AQ96MF6 247 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ZNF300Q96RE9 604 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 SLC25A31Q9H0C2 315 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 SOX17Q9H6I2 414 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 NT5DC2Q9H857 520 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 C19orf12Q9NSK7 152 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 NME7Q9Y5B8 376 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ABCA3Q99758 1704 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CIB4A0PJX0 185 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ADAM23O75077 832 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PTHP01270 115 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 IL1AP01583 271 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PROS1P07225 676 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 RAB40ALP0C0E4 278 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ARSBP15848 533 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 PRLHRP49683 370 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TAS2R19P59542 299 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ECH1Q13011 328 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 AGAP7PQ5VUJ5 663 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 AGAP6Q5VW22 663 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CD300LGQ6UXG3 332 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 CLECL1Q8IZS7 167 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 OR1J4Q8NGS1 313 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 SYNPRQ8TBG9 265 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 RAB40AQ8WXH6 277 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 DIO2Q92813 273 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 AGAP4Q96P64 663 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 GMLQ99445 158 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 ZNF436Q9C0F3 470 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 ZNF160Q9HCG1 818 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 TEX10Q9NXF1 929 aaPredicted RBP4.31□□□□□ -1.72
CHD9-221ENST00000615216 FTSJ1Q9UET6 329 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 RIMS3Q9UJD0 308 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 B3GALT1Q9Y5Z6 326 aa4.31□□□□□ -1.72
CHD9-221ENST00000615216 A6NCN8 305 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 OR2T1O43869 369 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 ADAMTS4O75173 837 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 TIMP1P01033 207 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 CTSAP10619 480 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 ACP2P11117 423 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 AHRP35869 848 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 SOX3P41225 446 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 POU3F4P49335 361 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 BLOC1S1P78537 153 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 RUNX3Q13761 415 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 IRF4Q15306 451 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 TBCEQ15813 527 aaPredicted RBP4.3□□□□□ -1.72
CHD9-221ENST00000615216 DCST2Q5T1A1 773 aa4.3□□□□□ -1.72
CHD9-221ENST00000615216 RAB39BQ96DA2 213 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms