RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 KANSL1Q7Z3B3 1105 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 VN1R4Q7Z5H5 301 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 OR2L13Q8N349 312 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 NANOGP1Q8N7R0 232 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 LSMEM1Q8N8F7 131 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ZFAND1Q8TCF1 268 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KLHL6Q8WZ60 621 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TMEM80Q96HE8 168 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RNF170Q96K19 258 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RIPOR3Q96MK2 946 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 NRTNQ99748 197 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ACTRT3Q9BYD9 372 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RBCK1Q9BYM8 510 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 MIXL1Q9H2W2 232 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 FGF20Q9NP95 211 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 GPR27Q9NS67 375 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TXNL4BQ9NX01 149 aaKnown RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 PTGFRNQ9P2B2 879 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 DIMT1Q9UNQ2 313 aaKnown RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TBC1D3KA0A087X1G2 549 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TBC1D3FA6NER0 549 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KLF4O43474 513 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 FRS3O43559 492 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KDM4BO94953 1096 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 GLULP15104 373 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 DRD1P21728 446 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RPS4Y1P22090 263 aaKnown RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 CPN2P22792 545 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 XKP51811 444 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 AP2S1P53680 142 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 GAS1P54826 345 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RAB14P61106 215 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 OC90Q02509 493 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TBC1D3GQ6DHY5 549 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SMAP2Q8WU79 429 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 UCN3Q969E3 161 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 CLEC4MQ9H2X3 399 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 IL21RQ9HBE5 538 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ZCCHC3Q9NUD5 404 aaKnown RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 MED17Q9NVC6 651 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 CLEC1BQ9P126 229 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 A0A087WV62 115 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 LATO43561 262 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 UGT2B17O75795 530 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 IFNGR2P38484 337 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 BNC1Q01954 994 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TNFRSF17Q02223 184 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 DECR1Q16698 335 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TMEM44Q2T9K0 475 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.12□□□□□ -0.799e-13■■□□□ 14.5
SENP3-EIF4A1-201ENST00000614237 CDC73Q6P1J9 531 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 PODNL1Q6PEZ8 512 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 COMTD1Q86VU5 262 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 PIAS4Q8N2W9 510 aaPredicted RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TMEM145Q8NBT3 493 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 GNPDA2Q8TDQ7 276 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 LRR1Q96L50 414 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 WDR92Q96MX6 357 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 BBS4Q96RK4 519 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KXD1Q9BQD3 176 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SLC38A1Q9H2H9 487 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 FGF22Q9HCT0 170 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 B3GAT2Q9NPZ5 323 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 IMP3Q9NV31 184 aaKnown RBP10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SEC14L4Q9UDX3 406 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 CLCA2Q9UQC9 943 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ENTPD4Q9Y227 616 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KCNK6Q9Y257 313 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 PGRMC2O15173 223 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ERI3O43414 337 aaKnown RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 AKAP8O43823 692 aaKnown RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 THBS1P07996 1170 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 CD3GP09693 182 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 NR2F1P10589 423 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ZNF91Q05481 1191 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 HTR4Q13639 388 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ARHGAP11BQ3KRB8 267 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SLC35F1Q5T1Q4 408 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ESPNLQ6ZVH7 1005 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SYT9Q86SS6 491 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 DIO2Q92813 273 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 GCDHQ92947 438 aaPredicted RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RNFT2Q96EX2 444 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 KCTD7Q96MP8 289 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 OR2A5Q96R48 311 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 OR7D2Q96RA2 312 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 DCLRE1CQ96SD1 692 aaKnown RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 C8orf33Q9H7E9 229 aaPredicted RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 SPHK1Q9NYA1 384 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 EXTL2Q9UBQ6 330 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 TRAPPC4Q9Y296 219 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 STK25O00506 426 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 ORC5O43913 435 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 RGS11O94810 467 aa10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 HMGN2P05204 90 aaKnown RBP10.11□□□□□ -0.79
SENP3-EIF4A1-201ENST00000614237 MAP3K8P41279 467 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms