RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SMSP52788 366 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 PNLIPRP1P54315 467 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 RPS21P63220 83 aaKnown RBP20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 SHC2P98077 582 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 DHODHQ02127 395 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 ZDHHC20Q5W0Z9 365 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 HBMQ6B0K9 141 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 RRM2BQ7LG56 351 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 TECPR1Q7Z6L1 1165 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 CMIPQ8IY22 773 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 OR6C4Q8NGE1 309 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 COQ10AQ96MF6 247 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 MYO15AQ9UKN7 3530 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 ABCA7Q8IZY2 2146 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 CFDP00746 253 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 LIMS3P0CW19 117 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 LIMS4P0CW20 117 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 LCN1P31025 176 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 CCR7P32248 378 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 RPL6Q02878 288 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 GINS1Q14691 196 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 TMEM44Q2T9K0 475 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 ASB18Q6ZVZ8 466 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 OAFQ86UD1 273 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 KLHDC8AQ8IYD2 350 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 NUS1Q96E22 293 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 LINC00052Q96N35 136 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 MTERF1Q99551 399 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 POMT2Q9UKY4 750 aa20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 KLF2Q9Y5W3 355 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-220ENST00000613744 TRAV6A0A075B6T7 132 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 TGM6O95932 706 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 RAB3AP20336 220 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF763Q0D2J5 394 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 SGCGQ13326 291 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 TCTN3Q6NUS6 607 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 TMEM91Q6ZNR0 172 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 MRGPREQ86SM8 312 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 TTLQ8NG68 377 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 DTD2Q96FN9 168 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC17A9Q9BYT1 436 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 PIKFYVEQ9Y2I7 2098 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 K7ESM1 405 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 LANCL1O43813 399 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 NPR2P20594 1047 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 CBX5P45973 191 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 MTNR1AP48039 350 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 DOC2AQ14183 400 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC5A12Q1EHB4 618 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 PLEKHS1Q5SXH7 462 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 HENMT1Q5T8I9 393 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 TMEFF1Q8IYR6 380 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 PM20D2Q8IYS1 436 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 SPACA7Q96KW9 195 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 RBCK1Q9BYM8 510 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 A4GALTQ9NPC4 353 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 CA5BQ9Y2D0 317 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 MAP4K5Q9Y4K4 846 aa20.47■□□□□ 0.87
POLR2J3-220ENST00000613744 GNG14A0A1W2PPG7 69 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 A8MXK9 166 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 MTX2O75431 263 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF8P17098 575 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 GSTM3P21266 225 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 GSG1Q2KHT4 349 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 CLVS2Q5SYC1 327 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 KIAA1161Q6NSJ0 714 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 CFAP77Q6ZQR2 320 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 BTN2A1Q7KYR7 527 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 OR8D4Q8NGM9 314 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 OR52N1Q8NH53 320 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 MARC2Q969Z3 335 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC38A2Q96QD8 506 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 MBNL1Q9NR56 388 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF624Q9P2J8 865 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 BAIAP2Q9UQB8 552 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 HRH3Q9Y5N1 445 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 GON4LQ3T8J9 2241 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 SDK1Q7Z5N4 2213 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 KDM4EB2RXH2 506 aaPredicted RBP20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 NCR1O76036 304 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 PCCBP05166 539 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 IGHV4-34P06331 123 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 SSTR2P30874 369 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 HOXA6P31267 233 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC1A3P43003 542 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 BDH1Q02338 343 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 DDX39BQ13838 428 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 TUSC1Q2TAM9 212 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 ENTPD8Q5MY95 495 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 WASH2PQ6VEQ5 465 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 KCT2Q8NC54 265 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 OR4K1Q8NGD4 311 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 RIT1Q92963 219 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 PPCDCQ96CD2 204 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 HCN3Q9P1Z3 774 aa20.46■□□□□ 0.87
POLR2J3-220ENST00000613744 DNAH14Q0VDD8 3507 aa20.45■□□□□ 0.86
POLR2J3-220ENST00000613744 SHISA3A0PJX4 238 aa20.45■□□□□ 0.86
POLR2J3-220ENST00000613744 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms