RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 A0A1W2PP18 115 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 SCDO00767 359 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 CTAG2O75638 210 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 TRAPPC6AO75865 159 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 GLSO94925 669 aaPredicted RBP16.07■□□□□ 0.16
MUC1-224ENST00000611577 IGKV1D-16P01601 117 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 IGHG3P01860 377 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 ZCCHC18P0CG32 403 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 OR12D1P0DN82 309 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 LCN1P31025 176 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 CRATP43155 626 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 TXNL4AP83876 142 aaKnown RBP16.07■□□□□ 0.16
MUC1-224ENST00000611577 MAPRE2Q15555 327 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.07■□□□□ 0.16
MUC1-224ENST00000611577 ARSKQ6UWY0 536 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 TMEM251Q8N6I4 163 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 ZNF527Q8NB42 609 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 GTF2H4Q92759 462 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 RAB8BQ92930 207 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 TMEM41AQ96HV5 264 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 LIME1Q9H400 295 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 RAD21L1Q9H4I0 556 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 PROK2Q9HC23 129 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 PPP4R1LQ9P1A2 415 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.07■□□□□ 0.16
MUC1-224ENST00000611577 ABCG2Q9UNQ0 655 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 NDUFAF1Q9Y375 327 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 WIF1Q9Y5W5 379 aa16.07■□□□□ 0.16
MUC1-224ENST00000611577 FLNAP21333 2647 aaKnown RBP16.07■□□□□ 0.16
MUC1-224ENST00000611577 A0A096LPI6 279 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 CCDC22O60826 627 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 TRIM3O75382 744 aaPredicted RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 ADH7P40394 386 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 MAGEA5P43359 124 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 MAN2A2P49641 1150 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 FOXO1Q12778 655 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 STX5Q13190 355 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 SLC25A35Q3KQZ1 300 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 GRAMD1BQ3KR37 738 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 MMEL1Q495T6 779 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 GTDC1Q4AE62 458 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 GPAT3Q53EU6 434 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 EXOSC6Q5RKV6 272 aaKnown RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 RTL6Q6ICC9 239 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 TRILQ7L0X0 811 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 LIX1LQ8IVB5 337 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 ZNF614Q8N883 585 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 MIPOL1Q8TD10 442 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 ZFP90Q8TF47 636 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 GPATCH1Q9BRR8 931 aaKnown RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 CLEC4MQ9H2X3 399 aaPredicted RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 SERHL2Q9H4I8 314 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 ZNF703Q9H7S9 590 aaPredicted RBP16.06■□□□□ 0.16
MUC1-224ENST00000611577 TPT1P8Q9HAU6 139 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 UBQLN4Q9NRR5 601 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 FLRT3Q9NZU0 649 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 ACAD8Q9UKU7 415 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 KCNE3Q9Y6H6 103 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 CAPN7Q9Y6W3 813 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 VPS13CQ709C8 3753 aa16.06■□□□□ 0.16
MUC1-224ENST00000611577 TMEM247A6NEH6 219 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 LRRC3CA6NJW4 275 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 AQP7O14520 342 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 SNPHO15079 494 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 CELA3AP09093 270 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 DRD4P21917 467 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 KLF10Q13118 480 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 SLC10A1Q14973 349 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 HYAL4Q2M3T9 481 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 FLYWCH1Q4VC44 716 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
MUC1-224ENST00000611577 C1orf185Q5T7R7 199 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 TIGD3Q6B0B8 471 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 OR4K17Q8NGC6 315 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 FAM110BQ8TC76 370 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 TSPEARQ8WU66 669 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 AURKBQ96GD4 344 aaPredicted RBP16.05■□□□□ 0.16
MUC1-224ENST00000611577 GNRHR2Q96P88 292 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 HOXD1Q9GZZ0 328 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 PAIP1Q9H074 479 aaKnown RBP16.05■□□□□ 0.16
MUC1-224ENST00000611577 SLC6A13Q9NSD5 602 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 FBXO34Q9NWN3 711 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 PLEKHA6Q9Y2H5 1048 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 PCDHB14Q9Y5E9 798 aa16.05■□□□□ 0.16
MUC1-224ENST00000611577 NCKAP5O14513 1909 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 A0A1B0GVC2 190 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 CLIC1O00299 241 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 NDUFB5O43674 189 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 FADS1O60427 444 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 WDR1O75083 606 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 STX11O75558 287 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 OXSR1O95747 527 aaPredicted RBP16.04■□□□□ 0.16
MUC1-224ENST00000611577 RFPL3SP0C7P2 107 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 PPIBP23284 216 aaKnown RBP16.04■□□□□ 0.16
MUC1-224ENST00000611577 DNASE1P24855 282 aa16.04■□□□□ 0.16
MUC1-224ENST00000611577 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms