RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 WFIKKN2Q8TEU8 576 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 OTUB2Q96DC9 234 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 MENTQ9BUN1 341 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 MOSPD1Q9UJG1 213 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 KPNA3O00505 521 aaPredicted RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 CDK2AP1O14519 115 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 DVL2O14641 736 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 TGM5O43548 720 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 SLC2A10O95528 541 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 RAB3BP20337 219 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 BMP8BP34820 402 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 NRG3P56975 720 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 CAP1Q01518 475 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 POU4F3Q15319 338 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 MAPK14Q16539 360 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 PRPF38BQ5VTL8 546 aaKnown RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 PLBD1Q6P4A8 553 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 ARL9Q6T311 187 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 C16orf62Q7Z3J2 963 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 BMP8AQ7Z5Y6 402 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 RNF113BQ8IZP6 322 aaKnown RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 UXS1Q8NBZ7 420 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 SORCS1Q8WY21 1168 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 HMX1Q9NP08 348 aaPredicted RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 AKAP7Q9P0M2 348 aaPredicted RBP20.84■□□□□ 0.93
SHANK2-220ENST00000608988 CHST2Q9Y4C5 530 aa20.84■□□□□ 0.93
SHANK2-220ENST00000608988 A0A1B0GTQ1 180 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 DUXAA6NLW8 204 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 NRG2O14511 850 aaPredicted RBP20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ZNF749O43361 778 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 TGM6O95932 706 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 C6P13671 934 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 PTGS2P35354 604 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 RPS7P62081 194 aaKnown RBP20.83■□□□□ 0.92
SHANK2-220ENST00000608988 PUDPQ08623 228 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 CEBPEQ15744 281 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ST3GAL2Q16842 350 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 POM121L1PQ3SYA9 428 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 EIPR1Q53HC9 387 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 LY6G5CQ5SRR4 150 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 TMEM65Q6PI78 240 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ZNF793Q6ZN11 406 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 HMGN2P46Q86SG4 172 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 GPAT4Q86UL3 456 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 IQCF2Q8IXL9 164 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.92
SHANK2-220ENST00000608988 NUP43Q8NFH3 380 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 GIMAP1Q8WWP7 306 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 C16orf58Q96GQ5 468 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 CCDC120Q96HB5 630 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ARPC5LQ9BPX5 153 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ACTRT3Q9BYD9 372 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 GSX2Q9BZM3 304 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 ZNF436Q9C0F3 470 aaPredicted RBP20.83■□□□□ 0.92
SHANK2-220ENST00000608988 QRSL1Q9H0R6 528 aaKnown RBP20.83■□□□□ 0.92
SHANK2-220ENST00000608988 TMEM5Q9Y2B1 443 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 KCNE3Q9Y6H6 103 aa20.83■□□□□ 0.92
SHANK2-220ENST00000608988 FAM86C2PA6NEL3 165 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 NAP1L6A6NFF2 107 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 TMEM127O75204 238 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 TYRP1P17643 537 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 LCN1P31025 176 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 MPIP34949 423 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 SRP9P49458 86 aaKnown RBP20.82■□□□□ 0.92
SHANK2-220ENST00000608988 EPHA5P54756 1037 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 ACTC1P68032 377 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 ACTA1P68133 377 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 DHODHQ02127 395 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 KLF9Q13886 244 aaPredicted RBP20.82■□□□□ 0.92
SHANK2-220ENST00000608988 C9orf64Q5T6V5 341 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 HEPHL1Q6MZM0 1159 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 LNX2Q8N448 690 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 TMIEQ8NEW7 156 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 MYLIPQ8WY64 445 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 LCORQ96JN0 433 aaPredicted RBP20.82■□□□□ 0.92
SHANK2-220ENST00000608988 RBP7Q96R05 134 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 LINC00597Q9H2U6 94 aa20.82■□□□□ 0.92
SHANK2-220ENST00000608988 ZNF593O00488 134 aaPredicted RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 FRS3O43559 492 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 SSNA1O43805 119 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 ERAL1O75616 437 aaKnown RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 MPC2O95563 127 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 TSFMP43897 325 aaKnown RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 OR10A3P58181 314 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 ST8SIA6P61647 398 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 TMEM52BQ4KMG9 183 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 SLC48A1Q6P1K1 146 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 SEZ6L2Q6UXD5 910 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 FAM98AQ8NCA5 519 aaKnown RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 FAM71CQ8NEG0 241 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 FANK1Q8TC84 345 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 TMEM255BQ8WV15 326 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 KISS1RQ969F8 398 aaPredicted RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 CNRIP1Q96F85 164 aaPredicted RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 COX14Q96I36 57 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 OR52D1Q9H346 318 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 MTG2Q9H4K7 406 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 MTHFD2LQ9H903 347 aaPredicted RBP20.81■□□□□ 0.92
SHANK2-220ENST00000608988 PLEKHA1Q9HB21 404 aa20.81■□□□□ 0.92
SHANK2-220ENST00000608988 MED9Q9NWA0 146 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms