RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 SLC35E2P0CK97 266 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CCL3P10147 92 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CD22P20273 847 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 TNFRSF1BP20333 461 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CNTFP26441 200 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GDF1P27539 372 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GALNSP34059 522 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 DEKP35659 375 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 DNASE1L1P49184 302 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SERPINB9P50453 376 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SCAND1P57086 179 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 NUP107P57740 925 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 RPS13P62277 151 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HERVK_113P63132 956 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ERVK-8P63133 956 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PSPHP78330 225 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 IGLV3-21P80748 117 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ID2Q02363 134 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PMPCAQ10713 525 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 IFT88Q13099 833 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GTF2H2Q13888 395 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 E2F2Q14209 437 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 RPS6KA2Q15349 733 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PCBP2Q15366 365 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 TOMM20Q15388 145 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HSPB2Q16082 182 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PFKFB4Q16877 469 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HYAL4Q2M3T9 481 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ZNF750Q32MQ0 723 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GXYLT1Q4G148 440 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PIGGQ5H8A4 983 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 C1orf185Q5T7R7 199 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 DEPDC1Q5TB30 811 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PRAMEF20Q5VT98 475 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ADNP2Q6IQ32 1131 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GTF2H2CQ6P1K8 395 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ZNF793Q6ZN11 406 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 NCCRP1Q6ZVX7 275 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 TRILQ7L0X0 811 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GOLGA7Q7Z5G4 137 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ISCA2Q86U28 154 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CTAGE6Q86UF2 777 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 C9orf40Q8IXQ3 194 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 TMEM251Q8N6I4 163 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CHDHQ8NE62 594 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 C17orf47Q8NEP4 570 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 OR5M9Q8NGP3 310 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 LILRB4Q8NHJ6 448 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HUS1BQ8NHY5 278 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 FBXO25Q8TCJ0 367 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PAQR8Q8TEZ7 354 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ZNF721Q8TF20 911 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 KCTD4Q8WVF5 259 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SREK1Q8WXA9 508 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 NXNL1Q96CM4 212 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HSPBAP1Q96EW2 488 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SENP5Q96HI0 755 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 JSRP1Q96MG2 331 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SECISBP2Q96T21 854 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 MTERF1Q99551 399 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 TTYH2Q9BSA4 534 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 FAIM2Q9BWQ8 316 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ERVK-6Q9BXR3 956 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 WWTR1Q9GZV5 400 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 AICDAQ9GZX7 198 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 OR51B5Q9H339 312 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ELOVL6Q9H5J4 265 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 LIN28AQ9H9Z2 209 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PNPLA3Q9NST1 481 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 DEPPQ9NTK1 212 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GIMAP4Q9NUV9 329 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ALKBH4Q9NXW9 302 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PSD3Q9NYI0 1048 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CPSF2Q9P2I0 782 aaKnown RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 HEY2Q9UBP5 337 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 PSME2Q9UL46 239 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ZNF490Q9ULM2 529 aaPredicted RBP3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 SNX6Q9UNH7 406 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ERVK-19Q9WJR5 959 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 STK38LQ9Y2H1 464 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 ATG4BQ9Y4P1 393 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CACNA1CQ13936 2221 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 GTF3C1Q12789 2109 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 CREBBPQ92793 2442 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 EXPH5Q8NEV8 1989 aa3.8□□□□□ -1.8
RNU4-89P-201ENST00000607443 A0A0A6YYD5 115 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 A0A0G2JMM0 328 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 A0A1W2PPB8 328 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 A0A1W2PRS3 328 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 KIR3DP1A8MWS1 328 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 STX16-NPEPL1H3BU86 382 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 FOXE1O00358 373 aaPredicted RBP3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 PLPP1O14494 284 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 STX16O14662 325 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 ACOX3O15254 700 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
RNU4-89P-201ENST00000607443 KLK8O60259 260 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms