RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LCMT2O60294 686 aaKnown RBP4.18□□□□□ -1.74
LINC00397-202ENST00000606785 RAMP1O60894 148 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 NPPAP01160 153 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 DBTP11182 482 aaKnown RBP4.18□□□□□ -1.74
LINC00397-202ENST00000606785 PGCP20142 388 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 LAP3P28838 519 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 SLC1A4P43007 532 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 MFAP2P55001 183 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ACTR3P61158 418 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 B2MP61769 119 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 BEX3Q00994 111 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF33BQ06732 778 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 FGL1Q08830 312 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 NECTIN1Q15223 517 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 CCL14Q16627 93 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 GGTA1PQ4G0N0 100 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 AADACL4Q5VUY2 407 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 TPGS2Q68CL5 300 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 THOC7Q6I9Y2 204 aaKnown RBP4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ZSCAN25Q6NSZ9 544 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 C8orf74Q6P047 294 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ACOT1Q86TX2 421 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 SLC38A6Q8IZM9 456 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 FAM9CQ8IZT9 166 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 BEST4Q8NFU0 473 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 HCAR2Q8TDS4 363 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 TAF15Q92804 592 aaKnown RBP eCLIP4.18□□□□□ -1.74
LINC00397-202ENST00000606785 MOCOSQ96EN8 888 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 SDSLQ96GA7 329 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ARL5BQ96KC2 179 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 C7orf34Q96L11 122 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ART5Q96L15 291 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 AMDHD1Q96NU7 426 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 CATSPER2Q96P56 530 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 TGM7Q96PF1 710 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 RBM4Q9BWF3 364 aaKnown RBP4.18□□□□□ -1.74
LINC00397-202ENST00000606785 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 RAB18Q9NP72 206 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 UFSP2Q9NUQ7 469 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF446Q9NWS9 450 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 MLXQ9UH92 298 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 PROCRQ9UNN8 238 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 GMPPBQ9Y5P6 360 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 CPQQ9Y646 472 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 MAP3K19Q56UN5 1328 aa4.18□□□□□ -1.74
LINC00397-202ENST00000606785 METP08581 1390 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 A0A0U1RQS6 177 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 RSPH10B2B2RC85 870 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 CYTH3O43739 400 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 EFNA2O43921 213 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 IGFBP1P08833 259 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 RSPH10BP0C881 870 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 CFC1BP0CG36 223 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 CFC1P0CG37 223 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 GCFC2P16383 781 aaKnown RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 SPRP35270 261 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 HAAOP46952 286 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 PLTPP55058 493 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ATP5IP56385 69 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 MRPS15P82914 257 aaKnown RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 BDH1Q02338 343 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 PLOD1Q02809 727 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ACY1Q03154 408 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 RGS1Q08116 209 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ELAVL3Q14576 367 aaKnown RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 GANABQ14697 944 aaKnown RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ZIC1Q15915 447 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 CFAP221Q4G0U5 840 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 PHYHD1Q5SRE7 291 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 FAM219BQ5XKK7 198 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 FAM71F2Q6NXP2 309 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ZNF600Q6ZNG1 722 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 NCCRP1Q6ZVX7 275 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 NANOGNBQ7Z5D8 188 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 LRRTM1Q86UE6 522 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 RNF130Q86XS8 419 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 SLC22A9Q8IVM8 553 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 TMEM123Q8N131 208 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ZSCAN4Q8NAM6 433 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 SUMF1Q8NBK3 374 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 STXBP6Q8NFX7 210 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 OR52K1Q8NGK4 314 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 OR5D13Q8NGL4 314 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 M1APQ8TC57 530 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 FNDC8Q8TC99 324 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 TBCKQ8TEA7 893 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 PPP1R14BQ96C90 147 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 PRICKLE1Q96MT3 831 aaPredicted RBP4.17□□□□□ -1.74
LINC00397-202ENST00000606785 GAL3ST1Q99999 423 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 EHD1Q9H4M9 534 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 CRLF2Q9HC73 371 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ABCC13Q9NSE7 274 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 SMOXQ9NWM0 555 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 LCMT1Q9UIC8 334 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 GAB2Q9UQC2 676 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ATP6V1DQ9Y5K8 247 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 MAD1L1Q9Y6D9 718 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms