RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PGS1Q32NB8 556 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 BHLHB9Q6PI77 547 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 CNEP1R1Q8N9A8 125 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 LINC01560Q8TB33 94 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 ACTRT2Q8TDY3 377 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 FIG4Q92562 907 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 NRGNQ92686 78 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 ZBTB8AQ96BR9 441 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 C20orf27Q9GZN8 174 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 AKTIPQ9H8T0 292 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 GPATCH2Q9NW75 528 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 HIVEP1P15822 2718 aa16.32■□□□□ 0.2
CCDC12-208ENST00000603885 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
CCDC12-208ENST00000603885 HRNRQ86YZ3 2850 aaPredicted RBP16.31■□□□□ 0.2
CCDC12-208ENST00000603885 SHISA8B8ZZ34 492 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 MSTNO14793 375 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 BGNP21810 368 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
CCDC12-208ENST00000603885 SOAT1P35610 550 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 OCRLQ01968 901 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 STX3Q13277 289 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 MPP2Q14168 576 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 PON3Q15166 354 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 DCST2Q5T1A1 773 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 GTPBP8Q8N3Z3 284 aaPredicted RBP16.31■□□□□ 0.2
CCDC12-208ENST00000603885 METTL25Q8N6Q8 603 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 ZNF527Q8NB42 609 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 OR5AK3PQ8NH89 298 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 FNDC9Q8TBE3 224 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 ZBTB9Q96C00 473 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 SH3YL1Q96HL8 342 aaPredicted RBP16.31■□□□□ 0.2
CCDC12-208ENST00000603885 SORT1Q99523 831 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 HOXD1Q9GZZ0 328 aa16.31■□□□□ 0.2
CCDC12-208ENST00000603885 C7orf72A4D263 438 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 A8MXE2 369 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 SMNDC1O75940 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC12-208ENST00000603885 FCGR2AP12318 317 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 CPOXP36551 454 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 HBA1P69905 142 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 CD226Q15762 336 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 SGCBQ16585 318 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 PLPPR5Q32ZL2 321 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 HHATQ5VTY9 493 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 FBXW10Q5XX13 1052 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 SPNS3Q6ZMD2 512 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 MTERF4Q7Z6M4 381 aaKnown RBP16.3■□□□□ 0.2
CCDC12-208ENST00000603885 WDR75Q8IWA0 830 aaKnown RBP16.3■□□□□ 0.2
CCDC12-208ENST00000603885 B4GALNT2Q8NHY0 566 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 ZNF845Q96IR2 970 aaPredicted RBP16.3■□□□□ 0.2
CCDC12-208ENST00000603885 PAIP2Q9BPZ3 127 aaKnown RBP16.3■□□□□ 0.2
CCDC12-208ENST00000603885 RNF122Q9H9V4 155 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 MED17Q9NVC6 651 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 HAO1Q9UJM8 370 aa16.3■□□□□ 0.2
CCDC12-208ENST00000603885 H3BNH8 94 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 EIF1AYO14602 144 aaKnown RBP16.29■□□□□ 0.2
CCDC12-208ENST00000603885 GOSR1O95249 250 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 FGFBP1Q14512 234 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 OR4F3Q6IEY1 312 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 VWA1Q6PCB0 445 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 GGNQ86UU5 652 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 CDC20BQ86Y33 519 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 LRRC34Q8IZ02 419 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 CLECL1Q8IZS7 167 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 PHOSPHO1Q8TCT1 267 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 NINJ1Q92982 152 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 STARD4Q96DR4 205 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 RNF145Q96MT1 663 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 DACH2Q96NX9 599 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 OR7D2Q96RA2 312 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 NUF2Q9BZD4 464 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 DPY30Q9C005 99 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 PAQR5Q9NXK6 330 aaPredicted RBP16.29■□□□□ 0.2
CCDC12-208ENST00000603885 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 EDARQ9UNE0 448 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 KCNE3Q9Y6H6 103 aa16.29■□□□□ 0.2
CCDC12-208ENST00000603885 NPIPA5A0A0B4J1W7 369 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 NPIPA7E9PJI5 369 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 RNASET2O00584 256 aaKnown RBP16.28■□□□□ 0.2
CCDC12-208ENST00000603885 NPIPA8P0DM63 369 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 CD1EP15812 388 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 LBPP18428 481 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 ME2P23368 584 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 KIR2DL2P43627 348 aaPredicted RBP16.28■□□□□ 0.2
CCDC12-208ENST00000603885 EIF1AXP47813 144 aaKnown RBP16.28■□□□□ 0.2
CCDC12-208ENST00000603885 ART1P52961 327 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 ATP12AP54707 1039 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 RAC1P63000 192 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 SIRPAP78324 504 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 BST1Q10588 318 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 KLHL26Q53HC5 615 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 PPP4R4Q6NUP7 873 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 BTLAQ7Z6A9 289 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 ANKRD42Q8N9B4 389 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 OR8J2Q8NGG1 315 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 OR5D16Q8NGK9 328 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 PRRG4Q9BZD6 226 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 NDRG3Q9UGV2 375 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 ABCA4P78363 2273 aa16.28■□□□□ 0.2
CCDC12-208ENST00000603885 RNF103-CHMP3A0A140T963 221 aa16.27■□□□□ 0.2
CCDC12-208ENST00000603885 SH3D21A4FU49 640 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms