RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 TIMM8AO60220 97 aaPredicted RBP19.25■□□□□ 0.67
UPF1-207ENST00000599848 SRFP11831 508 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 ZNF182P17025 639 aaPredicted RBP19.25■□□□□ 0.67
UPF1-207ENST00000599848 ETV6P41212 452 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 MAGEA3P43357 314 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 CATR1Q13166 79 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 C14orf28Q4W4Y0 310 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 FAM180BQ6P0A1 224 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 OR7G1Q8NGA0 311 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 FGF21Q9NSA1 209 aa19.25■□□□□ 0.67
UPF1-207ENST00000599848 CSF2P04141 144 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 FGF3P11487 239 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 PAX7P23759 505 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 CNR2P34972 360 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 OR8H3Q8N146 312 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 ARRDC3Q96B67 414 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 S100PBPQ96BU1 408 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 SGCZQ96LD1 299 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 ACSS1Q9NUB1 689 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 RIMS3Q9UJD0 308 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 OSMP13725 252 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 CPT2P23786 658 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 PITX1P78337 314 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 C17orf67Q0P5P2 114 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 TESQ9UGI8 421 aaKnown RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 PSAT1Q9Y617 370 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 IL2RGP31785 369 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 UQCRC1P31930 480 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 PLCXD3Q63HM9 321 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 FAM160A2Q8N612 972 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 SEMA6CQ9H3T2 930 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 B3GNT3Q9Y2A9 372 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 OR5K2Q8NHB8 316 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 SNAPC3Q92966 411 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 RTP4Q96DX8 246 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 ZBED3Q96IU2 234 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 ADOQ96SZ5 270 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 SOX17Q9H6I2 414 aaPredicted RBP19.24■□□□□ 0.67
UPF1-207ENST00000599848 STEAP1Q9UHE8 339 aa19.24■□□□□ 0.67
UPF1-207ENST00000599848 MRPS10P82664 201 aaKnown RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 DUSP6Q16828 381 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 PRSS16Q9NQE7 514 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 PLEKHJ1Q9NW61 149 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 MMP17Q9ULZ9 603 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 KLF13Q9Y2Y9 288 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 SHOXO15266 292 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 ZNF780AO75290 641 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 TRIM43Q96BQ3 446 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 SARAFQ96BY9 339 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 INPP5EQ9NRR6 644 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 PAQR5Q9NXK6 330 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 RP2O75695 350 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 GJA5P36382 358 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 RDH10Q8IZV5 341 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 GPR26Q8NDV2 337 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 CITED4Q96RK1 184 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 TTTY10Q9BZA0 68 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 NDRG3Q9UGV2 375 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 ZNF587BE7ETH6 402 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 TOR1AO14656 332 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 CRTAPO75718 401 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 ZNF44P15621 663 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 NPR2P20594 1047 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 PCGF2P35227 344 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 SPHARQ15513 63 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 MICAQ29983 383 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 CNPY1Q3B7I2 92 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 SGPP2Q8IWX5 399 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 BORCS6Q96GS4 357 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 FAM71F1Q96KD3 344 aaPredicted RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 SLC46A1Q96NT5 459 aa19.23■□□□□ 0.67
UPF1-207ENST00000599848 SETD1AO15047 1707 aaKnown RBP19.23■□□□□ 0.67
UPF1-207ENST00000599848 CD300LBA8K4G0 201 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 RAB3BP20337 219 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 ENPP1P22413 925 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 CPNE8Q86YQ8 564 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 NSUN5Q96P11 429 aaKnown RBP19.22■□□□□ 0.67
UPF1-207ENST00000599848 ATPIF1Q9UII2 106 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 RGS11O94810 467 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 SELEP16581 610 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 ATF4P18848 351 aaPredicted RBP19.22■□□□□ 0.67
UPF1-207ENST00000599848 PRR22Q8IZ63 422 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 ZNF420Q8TAQ5 688 aaPredicted RBP19.22■□□□□ 0.67
UPF1-207ENST00000599848 FAM46AQ96IP4 442 aaKnown RBP19.22■□□□□ 0.67
UPF1-207ENST00000599848 PBX4Q9BYU1 374 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 KCMF1Q9P0J7 381 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 STUB1Q9UNE7 303 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 ZNF814B7Z6K7 855 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 H7C1Q1 480 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 GPR137BO60478 399 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 RFPL1O75677 317 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 CAPN3P20807 821 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 RGNQ15493 299 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 CLVS2Q5SYC1 327 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 TTC9BQ8N6N2 239 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 OR5J2Q8NH18 312 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 UHRF1Q96T88 793 aaPredicted RBP19.22■□□□□ 0.67
UPF1-207ENST00000599848 BOCQ9BWV1 1114 aa19.22■□□□□ 0.67
UPF1-207ENST00000599848 APMAPQ9HDC9 416 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms