RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 FAM53CQ9NYF3 392 aa15.21■□□□□ 0.03
PNKP-210ENST00000597965 A0A1W2PRB8 838 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 CXCL13O43927 109 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 SASH3O75995 380 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 SOX30O94993 753 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 TP53P04637 393 aaPredicted RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 UROSP10746 265 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 PRPH2P23942 346 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 ELK4P28324 431 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 AGTR1P30556 359 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 IDUAP35475 653 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 SLC6A8P48029 635 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 MANFP55145 182 aaKnown RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 CARD18P57730 90 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 CTU2Q2VPK5 515 aaKnown RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 APOOLQ6UXV4 268 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 CXXC5Q7LFL8 322 aaKnown RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 SSX8Q7RTT4 187 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 GALNT10Q86SR1 603 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 HSD17B8Q92506 261 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 PIK3R3Q92569 461 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 AKAP1Q92667 903 aaKnown RBP eCLIP15.2■□□□□ 0.02
PNKP-210ENST00000597965 FBXW5Q969U6 566 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 RNF145Q96MT1 663 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 MDFIQ99750 246 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 MED17Q9NVC6 651 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 PSMC3IPQ9P2W1 217 aaPredicted RBP15.2■□□□□ 0.02
PNKP-210ENST00000597965 CLEC4AQ9UMR7 237 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 LAMP3Q9UQV4 416 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 RNF115Q9Y4L5 304 aa15.2■□□□□ 0.02
PNKP-210ENST00000597965 USF3Q68DE3 2245 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 A0A1W2PQD3 144 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 GXYLT2A0PJZ3 443 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 SHISA8B8ZZ34 492 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 SLC28A1O00337 649 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 TNFSF11O14788 317 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 RGS14O43566 566 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 GLRA3O75311 464 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 CRLF1O75462 422 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ADH6P28332 368 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ECHS1P30084 290 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 MAP3K8P41279 467 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 PRKAG1P54619 331 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 FOXA1P55317 472 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 DMTNQ08495 405 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 CLEC12BQ2HXU8 276 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 PRSS53Q2L4Q9 553 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 PLPPR5Q32ZL2 321 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 CCDC153Q494R4 210 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 FAM219BQ5XKK7 198 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ZYG11AQ6WRX3 759 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ZNF551Q7Z340 670 aaPredicted RBP15.19■□□□□ 0.02
PNKP-210ENST00000597965 HDXQ7Z353 690 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 SZRD1Q7Z422 152 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 LILRA2Q8N149 483 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ZNF527Q8NB42 609 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 NUP43Q8NFH3 380 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 OR4C3Q8NH37 302 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.19■□□□□ 0.02
PNKP-210ENST00000597965 OSTF1Q92882 214 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 GTPBP3Q969Y2 492 aaKnown RBP15.19■□□□□ 0.02
PNKP-210ENST00000597965 PPCDCQ96CD2 204 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 KLHL15Q96M94 604 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 CCT7Q99832 543 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ACSS1Q9NUB1 689 aaPredicted RBP15.19■□□□□ 0.02
PNKP-210ENST00000597965 C1orf109Q9NX04 203 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 NTMQ9P121 344 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 ZANQ9Y493 2812 aa15.19■□□□□ 0.02
PNKP-210ENST00000597965 DNHD1Q96M86 4753 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 NPIPB8E9PQR5 432 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 H3BNH8 94 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 GOLGA8RI6L899 631 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 UBFD1O14562 309 aaKnown RBP15.18■□□□□ 0.02
PNKP-210ENST00000597965 TBX19O60806 448 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 CHEK2O96017 543 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 IGKV1D-16P01601 117 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 CD3EP07766 207 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 ALOX5P09917 674 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 PYGBP11216 843 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 NEFHP12036 1026 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 IL32P24001 234 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 PSMA4P25789 261 aaKnown RBP15.18■□□□□ 0.02
PNKP-210ENST00000597965 CCT5P48643 541 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 PRIM2P49643 509 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 DNAJB13P59910 316 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 TNK1Q13470 666 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 VEZF1Q14119 521 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 P2RY6Q15077 328 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 HEPHL1Q6MZM0 1159 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 B4GALNT2Q8NHY0 566 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 HOXD1Q9GZZ0 328 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 REEP4Q9H6H4 257 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 C12orf49Q9H741 205 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 LRTM1Q9HBL6 345 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 TMED5Q9Y3A6 229 aa15.18■□□□□ 0.02
PNKP-210ENST00000597965 FBN3Q75N90 2809 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms